Bartonella sp. 1-1C: B11Cv2_006800
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Entry
B11Cv2_006800 CDS
T05463
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
baro
Bartonella sp. 1-1C
Pathway
baro03030
DNA replication
baro03430
Mismatch repair
baro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B11Cv2_006800
03430 Mismatch repair
B11Cv2_006800
03440 Homologous recombination
B11Cv2_006800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baro03032
]
B11Cv2_006800
03400 DNA repair and recombination proteins [BR:
baro03400
]
B11Cv2_006800
Enzymes [BR:
baro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B11Cv2_006800
DNA replication proteins [BR:
baro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B11Cv2_006800
DNA repair and recombination proteins [BR:
baro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B11Cv2_006800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATO57444
LinkDB
All DBs
Position
complement(743427..746915)
Genome browser
AA seq
1162 aa
AA seq
DB search
MLGKKRKTSDNKNSLPRFIHLRVHSAYSLLEGALKIKQIIQHAISDRMPAIAITDTNNLF
GALEFSQYCFSDGIQPIIGCQLAIDFGDENCNSPLTKLRHSSDYSSIVLFAASETGYSHL
VRLVSRAYLDKNDTDLPHIKADFLLRHHEGIIALTGGPGGPINSALTEDKKERAIERLTY
LKKIFGDRLYIELQRHGSYDRKVEEALIELAYTYEIPLVATNEAFFLNKEGYAAHDALMA
VAEGKVVSNPNRKRVTLDHYLKSQDEMVSLFFDLPEALENSVEIALRCHAYAPIRKPILP
GFIERSADTSSVLEAEAKELLDQAKAGLKMRLETIGLAEGYTIADYEQRLNYEISVITRM
QFSGYFLIVSDFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIRYVQQKYGCDQVAQIITFGKLQARAVLRDVGRVLEVPYRL
VDYLTKLVPATPGSNIELAQAIIDEPKFEEEKKKDPVIGRMLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQSGLVKFDFLGLKTLTVLKMAVDFVA
RKGTKVDLSHIPLNDEATYAMMSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVALY
RPGPMENISTYNIRKHKEEEITSIHPKIDHLVKETQGVIVYQEQVMQIAQELAGYSLGEA
DLLRRAMGKKIHKEMQEQRARFVSGAVDGGLDKEQANVIFDLLAKFADYGFNKSHATAYA
IVSYHTAYMKAHHPVEFLAASMTYDMTNTDKLNDFRREALRLGIEVIAPCVQTSHRIFEV
GENCIYYSLSAVKGVGDMVVDHIVACRGDKPFRDLEDFCERIDPRIVNKRAMESLIYAGA
FDCFNVAREVLLASLVTLNARALRILDNNSSGQVDIFEMVGGLKEPLILSQASPWSVAEK
LHYEFQVIGFYFSAHPLSEYQDVLIKKRVQTWNNFAASVKGGATAARLAGTVVAKQIRKT
KSGKKMGVIQFSDTSGQYEAVIFSEGLSVYGDMLELGKSFIITVIAEDRSEGISLRIETI
QSLEEQALQCHKMMRIFLKTIDTLSQIEQNLNSEGKGEVALILIQEDGLREVEIALPERY
KVNAHVVNAIKVLSGVVDVELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgttaggaaaaaaaagaaaaacatccgataacaaaaattctctccctcgctttattcac
ttgagggtgcactcagcttattcgcttcttgaaggtgctttaaaaatcaaacaaatcatt
cagcatgccatttctgatcgtatgcctgccatagctattacggatacaaataatttattt
ggtgctttagagttttcacaatactgtttttctgatggtattcaacctattattggttgt
cagcttgctattgattttggtgatgaaaattgtaattcacctttaactaaattgcgtcat
tcttctgattattcttccattgtattatttgctgcgagtgaaacaggttattcacatttg
gttcgacttgttagtcgtgcatatcttgataagaatgatacggatcttccccatattaaa
gccgactttctcttaagacaccatgaaggaattattgctttaactggtggaccaggaggg
cctattaattcggctttaactgaagataaaaaagaacgagctattgagcgtttaacttat
ttgaagaaaatttttggtgatcgtctttatattgaattacaacggcatggttcttatgat
cggaaagtggaagaagcgcttattgaactagcttacacctatgagattcctcttgttgct
actaatgaggcattttttctcaataaagaaggatatgccgctcatgatgcgctcatggct
gttgcggaagggaaagttgtttctaatccaaatcgtaaacgtgtgacattagatcattat
ttaaagtcacaagatgaaatggtttcactgttttttgatcttccggaagctttggaaaat
agtgttgagattgctttacgatgtcatgcttatgcaccaattagaaaaccgattttgcct
ggttttatagagcgatctgcagatacatcctctgttttagaagcagaagctaaggaatta
ttagatcaagccaaagccggtttaaaaatgcgtcttgagacaattggtttagcagaaggt
tatacaattgcagattatgagcagcggcttaattatgaaatttcagttattacgcggatg
caattctctggttattttctcattgtttcggattttatcaaatgggcaaaagctcatgat
attcctgttggtccagggcgtggttctggtgctgggtcgcttgttgcttatgcgctaacg
atcactgatgttgatcctttacgtttttctcttttatttgaacgttttcttaatccagat
cgtgtctctatgccagattttgatatcgatttttgccaagaacgacgcgaagaggttatt
cgttatgttcagcaaaaatatggttgcgatcaagtcgctcagattatcacattcggtaaa
ttgcaagcacgtgcagtattgcgtgatgttggtcgtgttttagaggtaccttatcgtctg
gtagactatctgacaaaattagttcctgctactcctggtagtaatattgagttagcacaa
gctattatagatgaaccaaaatttgaagaagaaaagaaaaaggaccctgttattgggcgc
atgttagatatagcacttcagctagaaggactctatcgtcatgcctctactcatgctgca
gggattgttattggtgatcgtccattatcagaacttgtgccgatgtatcgtgatccgcgc
tctgatatgcctgtaactcaatttaacatgaaatatgttgaacaatctggattagtaaaa
tttgattttttaggtttaaaaacacttactgttttaaagatggctgttgattttgttgca
cgaaaaggcacaaaggtagatttatcgcatattccgcttaatgatgaagcaacttatgct
atgatgtcacgcggtgaaacagttggcgtgtttcaagttgaaagtgctggtatgcgtaag
gcacttatcggtatgaggccagattgtattgaagatattattgctcttgtagcgctttat
cgtcctggtccgatggagaatatttcgacatataatatacgcaaacataaagaagaagaa
attacctctattcatcctaaaatagatcatttagttaaagaaacgcaaggtgttattgtt
tatcaagaacaagtgatgcagattgctcaggagcttgctggctactcactcggagaagca
gatttattgcgtagagctatgggtaaaaaaattcataaagaaatgcaagaacaacgtgca
cgctttgtaagtggggctgttgatggtggccttgataaggagcaggctaatgtaatcttt
gatcttttagcaaaatttgcggattacggttttaataagtcgcatgctaccgcttatgcg
attgtttcttatcatacagcttatatgaaggcacaccatcctgtagagtttttggctgca
tctatgacatatgatatgacaaatacagataagctcaatgattttcgacgcgaggcatta
agattaggaattgaggttattgcgccctgtgtgcaaacatcacaccgcatttttgaagtt
ggtgagaattgtatttattattccctttctgctgttaaaggagtgggagatatggtcgtt
gatcatattgtggcttgtcgtggagataagccttttagggatctagaagatttttgtgaa
cgtattgatcctcgtattgtgaataaacgtgctatggagagtttgatttacgctggcgcc
tttgattgttttaatgttgctcgtgaagttctattagcaagcctagtaactcttaatgca
cgtgctcttcgtattcttgataataattctagtgggcaagtcgatatatttgagatggta
ggtgggttaaaagagcctttgattttatctcaagcctctccttggtctgttgctgagaaa
cttcattatgaatttcaggtaataggtttttatttttctgctcatcctttgagtgagtac
caagatgttcttattaaaaaacgtgttcagacttggaacaattttgctgcttcagttaaa
gggggagctactgctgctcggcttgctggaactgttgtagcaaaacaaattcgtaaaaca
aaatctggtaagaaaatgggagttatccagttttctgatacgagtgggcaatatgaagca
gttatattttccgaaggactttctgtgtacggagatatgctggagcttggaaaatctttt
atcattacagttattgcagaggatcgctctgaaggaattagtttgcgtattgaaacaatt
cagtccttagaagaacaagcactgcaatgtcataaaatgatgcgcatttttctaaaaaca
atagatacgctatcacaaattgagcagaatttgaattctgaaggcaaaggagaggtagca
cttatactaattcaagaggacggccttcgagaagttgagatagctcttccagaaaggtat
aaagtgaatgctcatgtagtcaatgctataaaagttctttctggtgttgttgatgtcgag
ttaagctaa
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