Bartonella sp. 1-1C: B11Cv2_013280
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Entry
B11Cv2_013280 CDS
T05463
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
baro
Bartonella sp. 1-1C
Brite
KEGG Orthology (KO) [BR:
baro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baro03400
]
B11Cv2_013280
Enzymes [BR:
baro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B11Cv2_013280
DNA repair and recombination proteins [BR:
baro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B11Cv2_013280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
GvpD_bR2
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ATO58064
UniProt:
E6YT80
LinkDB
All DBs
Position
complement(1486777..1489908)
Genome browser
AA seq
1043 aa
AA seq
DB search
MKSNDRTPRIFSISLGTPFLPHFVDALLSGTLIDNFASNGDIQTALADTLIYVPTRRAAR
ALRTAFFEKSHTKSSFLPTICPLGDINEKSFLFVENNENTLLNTPPIGESERLLLLARLI
RLWRENLPTHLQSMFGTEDVFIPARTADAIWLAQDLAHLMDEIETESVDWSRLKEIVPDM
VAEWWQITLDFLTIVTQSWPQILKERQQCNPAEWRNQAFKMHTDILYRTQPHKTIIAAGV
ASSIPTIANLLKVIACLPKGAVILPGLDLQMDEIQWNALGAFNKEKTTFNPSDHIAAFSH
PQYHLKKLLSLMKCQRIHVREIGQQSAIKIQRAVLLSEALRPASTTDLWAQITRDDYENI
CADWSLIEAPNEREEALAISLALRNTIEDPKKTAALVTNDRNLARRVAAELQRFGIEAND
SGEIPLAQTLPATLLRLLLENIFKPGDPVAFLSLLKHPLTTLEYNHNYLREMAENFELLV
LRGNSCRINLCECDQFFKTWMQTHFHKISKSYMPDLQKIEEAKFLCHLLVRAVEPLVTLI
KQERECSINEAAIATVEVFENFGRDADNSLAHLYQNEAGKALATFLRELVSDQSGLKFHL
YEWPALFSALMATRSVSPSLGGHPRLFIWGTLESRLQTVNTVVIGSLNEGSWPIKTHNDA
FLSRPMKMTLTLEPPEQRIGLSAHDFQWAMGMDQVIMSRATRVNHTPSVPSRWLQRLETV
IGKQVWKQICTRGELFLHWAKMLDNTKSIIPAERPCPVPPLDMRPRHFSVTEIETLRHDP
YAIYAKKILRLKPLKPLIHDPCSAERGTLYHAILAAFCTQIKNQNATNMLEILLTIGRKE
FDKLNLPPDIEIIWWLNFENLAPFLIQWEQSLGSRKRYAEVIAQNTLIGETGVTLSGRAD
RLDILPDKTVEIIDFKTSTPPSSTQVINLFSPQLALETALLMQGAFVDFKGLTPSNLLYI
SLKGKGTIKPIAIINKKTKDQENAISLGKKAWKYLISLINYYQNPQQGYLSHAVPLKKSY
EGDYDHLARLLEWSIGFDKADQS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaatgaccgtaccccccgtatattttctatttccctcggaactccttttctg
cctcattttgttgatgcacttctctctggaactcttattgataactttgcatcaaatggg
gatatccaaaccgctcttgctgatactcttatttatgtaccaacacgccgcgctgctcgt
gcattacgaacagctttttttgaaaaaagccatacaaaatctagctttttgcctaccata
tgtcccttgggagatataaatgaaaaaagttttctttttgttgaaaataatgaaaatact
ttgctcaatactccccctattggagaaagtgaacgtctccttcttttagcccgtcttatt
cgcctttggcgtgaaaatttaccaactcatctacagtctatgtttggcacagaagatgtt
tttattcctgctaggaccgctgatgcaatttggcttgcccaagatttagcacacttgatg
gatgaaatagaaacagaatctgtagattggtcaagacttaaagaaattgtacccgatatg
gttgccgaatggtggcaaataaccttagattttctcactattgtaacacaaagctggcca
caaattttaaaagaaagacaacaatgtaatcccgctgaatggcgtaatcaagcattcaaa
atgcatacagatattttataccgtacacaacctcataaaactattatcgctgctggtgta
gcaagctccattcctacaattgcaaatcttttaaaagtaattgcctgtttaccaaaagga
gctgtgattcttccaggccttgaccttcaaatggatgaaatacaatggaatgccttaggt
gcatttaataaagaaaaaacaacttttaacccttctgaccatattgctgcttttagtcat
cctcaatatcatttaaaaaaacttttatctctcatgaaatgtcaacgcattcatgtccgc
gaaatcggtcagcaaagcgctataaaaatccaacgtgctgttcttttatcggaagcatta
cgaccagcttccacgacagatttatgggctcaaatcacacgtgatgattatgaaaatatt
tgtgcagattggtcattgattgaagctcccaatgagcgtgaagaagctttagctatttct
cttgccttacgcaataccattgaagatcctaaaaaaactgcagcacttgttacaaatgac
cgcaatttagcacgtcgtgtagcagctgaattacaaagatttggaattgaagccaatgac
tcaggtgaaataccacttgcacaaacattacctgcaaccctattacggcttcttttagaa
aacatttttaaacctggtgatcccgttgcttttctttctcttctcaaacatccactcaca
acattagaatataatcataattatttgcgtgagatggctgagaattttgaattacttgtc
cttcgaggaaattcttgccggattaatctttgtgaatgtgaccaattttttaaaacatgg
atgcaaacacattttcataagatttctaagagttatatgcctgatttacaaaagattgaa
gaagcaaagtttctttgtcatcttttagtcagagcagttgaacctttagtgacattaata
aaacaagagagagaatgcagcatcaatgaagctgctatagcaactgttgaagtttttgaa
aattttggtcgcgatgctgataattctcttgcacatctttatcaaaatgaagcaggcaaa
gccttagcaacttttttgcgtgaattggttagtgatcaatcaggattaaaatttcatctt
tatgaatggcctgctctgttttcagctctgatggccacccgttctgtgagtccttccctt
ggaggacatcctcgtttgtttatctggggaactttggaatcgcgtttgcaaaccgttaat
acagtggtcataggtagtttaaatgagggatcatggccgataaaaacccacaatgacgct
tttttatcacggccaatgaaaatgactttaactcttgaaccaccagaacaacgtattggc
ctttcggctcatgatttccagtgggcgatgggaatggatcaagtgattatgagtcgagct
acacgcgtcaatcatactccttctgttccatcacgctggctacaacgtttagaaaccgtt
ataggcaaacaagtttggaagcaaatctgcacacgaggagaactcttccttcattgggca
aaaatgctggataatacaaagagcatcatccctgcggaacggccttgccctgtaccacca
cttgatatgcgtccacgccatttttcagtcacagaaatagaaacattacggcatgatcct
tatgccatttatgcaaaaaaaatcttacgactcaaaccacttaaaccactcatccatgat
ccttgttcagctgagcgtggaacactttatcatgctattcttgctgccttttgcacacaa
ataaaaaatcaaaatgctactaatatgctcgagatattactcaccattggacgtaaagaa
tttgataaattaaatttacctcctgatattgaaataatttggtggctaaattttgaaaat
cttgctccctttctgattcaatgggaacaaagccttggatcaagaaaacgatatgctgaa
gttattgctcaaaacaccctcataggagaaacaggggtaactctttcaggacgtgcagat
cgtcttgatattttgccagataaaacagttgaaatcattgattttaaaaccagcactccc
ccttcatcgacacaggttattaacttattttctccacaattagcattagagacagcttta
ttaatgcaaggagcctttgtagattttaagggtcttactccctctaatttactttacatt
tccttaaaaggaaaagggacaattaaacctatagccattataaataaaaaaacaaaagat
caagaaaacgcaatctctcttggtaaaaaagcatggaagtatcttatttcattgatcaat
tattatcagaatccacaacaaggttatctttcacatgcagttcccttaaaaaaatcttat
gaaggcgactatgaccatctagctcgattattagaatggtctattggtttcgataaagcg
gatcaatcatga
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integrated database retrieval system
