Bartonella sp. Raccoon60: Bra60_000630
Help
Entry
Bra60_000630 CDS
T05326
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
barr
Bartonella sp. Raccoon60
Pathway
barr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
barr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bra60_000630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barr03400
]
Bra60_000630
Enzymes [BR:
barr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bra60_000630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bra60_000630
DNA repair and recombination proteins [BR:
barr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bra60_000630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
KH_SLS1_1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AQX26089
LinkDB
All DBs
Position
67477..68352
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL
LFSLSNNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINIRAKDDKIYRLTYN
DVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSIV
AGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLESTNFLAQNICNVITEAIASGGTSLR
DYMHADSSLGYFQHHFSVYGREGKECLNCRVPIVRIVQSGRSSFYCPQCQK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtggaaacggttcgccgtgggcttgatccgtttttaactggt
gcaaaaattatatctgttcaacttaatcgtaaaaatttgcgttttccttttccagaagca
ttttctgagcgattagtaggcagaacgattatacaacttagtcgtcgcgcgaaatattta
ttattttctctttcaaacaatgaaacgattttgagtcatttaggtatgtcaggatcgtgg
cgtatagagggtgaatttttaagcaaggagcattcttctataagcaaattagttgagcat
gatcattgcattataaatattcgggcaaaagatgataaaatttatcgtctcacttataat
gatgttcgccgttttggttttatgcttttaacagatacaacaaagctttatgaacatcca
tttttaagaaggctaggggttgagcctatgaacaatacgctttctggtgcttatttaaaa
aaagcttttgctaataaaaaaacatctctgaaaacagctttgcttgatcaatctattgtt
gctggccttgggaatatttatgtttgtgaagcactttggcgtagtcatttatcaccacag
cggaatgcatttacattggcgttagaagatgtacatacactggaatctacaaattttctt
gcacaaaatatatgtaatgtgattactgaagcaattgcttctggggggacttctttacgt
gattatatgcatgcagatagttcacttggatattttcaacaccatttttcggtttatgga
cgtgaaggaaaagaatgtttgaattgtagggtacctattgtgcgtattgtacagtcaggt
cgttcaagcttttattgtccacaatgtcaaaaatga
DBGET
integrated database retrieval system
