Bartonella sp. Raccoon60: Bra60_006940
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Entry
Bra60_006940 CDS
T05326
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
barr
Bartonella sp. Raccoon60
Pathway
barr03030
DNA replication
barr03430
Mismatch repair
barr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
barr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bra60_006940
03430 Mismatch repair
Bra60_006940
03440 Homologous recombination
Bra60_006940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barr03032
]
Bra60_006940
03400 DNA repair and recombination proteins [BR:
barr03400
]
Bra60_006940
Enzymes [BR:
barr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bra60_006940
DNA replication proteins [BR:
barr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bra60_006940
DNA repair and recombination proteins [BR:
barr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bra60_006940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AQX26697
LinkDB
All DBs
Position
complement(737150..740638)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSGKKRKTPDNKNSLPRFIHLRVHSAYSLLEGALKVKQIIQHAISDRMPAIAITDTNNLF
GALEFSQYCFSDGIQPIIGCQLAIDFCDENCNLPLTKLRHSSDYSSIVLFAASETGYSHL
VRLVSRAYLDKNDTDLPHIKADFLLRHHEGIIALTGGPGGPINLALTEDKKERAIERLTY
LKKIFGDCLYVELQRHGSYDWKVEEALIELAYTYEIPLVATNEAFFLNKEGYAAHDALMA
VAEGQVVSNPNRKRVTSDHYLKSQDEMVSLFSDLPEALENSVEIALRCHAYAPIRKPILP
GFIERSADTSSVLEAEAKELLDQAKAGLKMRLETIGLAEGYTIADYEQRLNYEISVITRM
QFSGYFLIVSDFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIRYVQQKYGCDQVAQIITFGKLQARAVLRDVGRVLEVPYRL
VDYLTKLVPATPGSNIELAQAIIDEPKFEEEKKKDPVIARMLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQSGLVKFDFLGLKTLTVLKMAVDFVA
RKGTKVDLSHIPLNDEATYAMMSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVALY
RPGPMENISTYNIRKHKEEEITSIHPKIDHLVKETQGVIVYQEQVMQIAQELAGYSLGEA
DLLRRAMGKKIHKEMQEQRARFVSGAVDGGLDKEQANVIFDLLAKFADYGFNKSHATAYA
IVSYHTAYMKAHHPVEFLAASMTYDMTNTDKLNDFRREALRLGIEVIAPCVQTSHRIFEV
GENCIYYSLSAVKGVGDMVVDHIVACRGDKPFRDLEDFCERIDPRIVNKRAMESLIYAGA
FDCFNVAREVLLASLVTLNARALRILDNNSSGQVDIFEMLGGLKEPLILSQASPWSVAEK
LHYEFQVIGFYFSAHPLSEYQDVLIKKRVQTWNNFAASVKGGATAARLAGTVVAKQIRKT
KSGKKMGVIQFSDTSGQYEAVIFSEGLSVYGDMLEPGKSFIITVIAEDRSEGISLRIETI
QSLEEQALQCHKMMRIFLKTIDMLPQIEQNLNSEGKGEVALVLIQEDGLREVEIALPERY
KVNAHVVNAIKVLSGVVDVELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaggaaaaaaaagaaaaacacccgataataaaaactctctccctcgctttattcac
ttgagggtacactcagcttattcacttcttgaaggtgctttaaaagtcaaacaaatcatt
cagcacgccatttctgatcgtatgcctgccatagctattacggatacaaataatttattt
ggtgctttagagttttcacaatactgtttttctgatggtattcaacctattattggttgt
cagcttgctattgatttttgtgatgaaaattgtaatttacctttaactaaattgcgtcat
tcttctgattattcttccattgtattatttgctgcgagtgaaacaggttattcgcatttg
gttcggcttgttagtcgtgcatatcttgataagaatgatacggatcttccgcatattaaa
gctgattttctcttaagacaccatgaaggaattattgctttaactggtggaccaggaggg
cctattaatttggctttaactgaagataaaaaagaacgagctattgagcgtttaacttat
ttgaagaaaatttttggtgattgtctttatgttgaattacaacggcatggttcttatgat
tggaaagtggaagaagcgcttattgaactagcttacacctatgagattcctcttgttgct
actaatgaggcattttttctcaataaagaaggatatgctgctcatgatgcgctcatggct
gttgcggaagggcaagttgtttctaatccaaatcgtaaacgtgtgacatcagatcattat
ttaaagtcacaagatgaaatggtttcactgttttctgatcttccggaggctttggaaaat
agtgttgaaattgctttacgctgtcatgcttatgcaccaattagaaaaccgattttgcct
ggttttatagagcgatctgcagatacatcctctgttttagaagcagaagctaaggaatta
ttagatcaagccaaagccggtttaaaaatgcgtcttgagacaattggtttagcagaaggc
tatacaattgcagattatgagcagcggcttaattatgaaatttcagttattacgcggatg
caattctctggttattttctcattgtttcggattttatcaaatgggcaaaagctcatgat
attcctgtcggtccagggcgtggttctggtgctgggtcccttgttgcctatgcactaacg
atcactgatgttgatcctttacgtttttctcttttatttgaacgttttcttaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagaacgacgcgaagaagttatt
cgttatgttcagcaaaaatatggctgcgatcaagtcgctcagattattacattcggtaaa
ttgcaagcacgtgcagtattgcgtgatgttggtcgtgttttagaggtaccttatcgtctg
gtagattatctgacaaaattagttcctgctactcctggtagtaatattgagttagcacaa
gctattatagatgaaccaaaatttgaagaagaaaagaaaaaggaccctgttattgcgcgt
atgttagatatagcacttcagttagaaggactctatcgtcatgcctctactcatgctgca
gggattgttattggtgatcgtccattatcagagcttgtaccgatgtatcgtgatccacgc
tctgatatgcctgtaactcaatttaatatgaaatatgttgaacaatctggattggtaaaa
tttgattttttaggtttaaaaacgcttactgttttaaagatggctgttgattttgtcgca
cgaaaaggcacgaaggtagatttatctcatattccccttaatgatgaagcaacttatgct
atgatgtcacgtggtgaaacagttggcgtgtttcaagttgaaagtgctggtatgcgtaaa
gcacttattggtatgaggccagattgtattgaagatattattgctcttgtagcgctttat
cgtcctggtccgatggagaatatttcgacatataatatacgcaaacataaagaagaagaa
attacctctattcatcctaaaatagaccatttagttaaagaaacgcaaggtgttattgtt
tatcaagaacaagtgatgcagattgctcaggaacttgctggctactcacttggagaagca
gatttattgcgtagagctatgggtaaaaaaattcataaagaaatgcaagaacaacgtgca
cgctttgtaagtggggctgttgatggtggccttgataaggagcaggctaatgtaatcttt
gatcttttagcaaaatttgcggattacggttttaataagtcgcatgctaccgcttatgcg
attgtttcttatcatacagcttatatgaaagcacaccatcctgtagagtttttggctgca
tctatgacatatgatatgacaaatacagataagctcaatgattttcgacgtgaggcatta
agattaggaattgaggttattgcgccctgtgtgcaaacatcacaccgcatttttgaagtt
ggtgagaattgtatttattattccctttctgctgttaaaggggtaggagatatggtcgtt
gatcatatcgtggcttgtcgtggagacaagccttttagggatttagaagatttttgtgaa
cgtattgatcctcgtattgtgaataagcgtgctatggagagtttgatttacgctggcgcc
tttgattgttttaatgttgctcgtgaagttctactagcaagcctggtaactcttaacgca
cgtgctcttcgtattcttgataataattctagtgggcaagttgatatatttgagatgtta
ggtgggttaaaagagcctttgattttatctcaagcatctccttggtctgttgctgagaaa
cttcattatgaatttcaggtaataggtttttatttttctgctcatcctttgagtgagtat
caagatgttcttattaaaaaacgtgttcagacttggaacaattttgctgcttcagttaaa
gggggagctactgctgcccggcttgctggaactgttgtagcaaaacaaattcgtaaaaca
aaatctggtaagaaaatgggagtgattcagttttctgatacgagtgggcaatatgaagca
gttatattttccgaaggactttctgtatacggagatatgctggagcctggaaaatctttt
atcattacagttattgcggaggatcgctctgaaggaattagtttgcgtattgaaacaatt
cagtccttagaagaacaagcactgcaatgtcataaaatgatgcgcattttcctaaaaaca
atagatatgctaccacaaattgagcagaatttgaattctgaaggcaaaggagaggtagca
cttgtactaattcaagaggacggacttcgagaagttgagatagctcttccagaaaggtat
aaagtgaatgcccatgtagtcaatgctataaaagttctttctggtgtagttgatgtcgag
ttaagctaa
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