Bartonella sp. CDC_skunk: Bcsk_000050
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Entry
Bcsk_000050 CDS
T11834
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bars Bartonella sp. CDC_skunk
Pathway
bars03030
DNA replication
bars03410
Base excision repair
bars03420
Nucleotide excision repair
bars03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bars00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcsk_000050
03410 Base excision repair
Bcsk_000050
03420 Nucleotide excision repair
Bcsk_000050
03440 Homologous recombination
Bcsk_000050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bars03032
]
Bcsk_000050
03400 DNA repair and recombination proteins [BR:
bars03400
]
Bcsk_000050
Enzymes [BR:
bars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcsk_000050
DNA replication proteins [BR:
bars03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bcsk_000050
DNA repair and recombination proteins [BR:
bars03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bcsk_000050
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcsk_000050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH_2
WHD_BrxR
SWIM_C
Motif
Other DBs
NCBI-ProteinID:
AQX20672
LinkDB
All DBs
Position
3818..6724
Genome browser
AA seq
968 aa
AA seq
DB search
MKENDHLFLVDGSGYIFRAYHALPPLKRKKDGLPVGAVAGFCNMLWKLLCDARNTAIGVV
PTHIAIIFDYSSNTFRKEIYPQYKANRAAPPEDLIPQFALIRQATKAFNLPCIEKEGFEA
DDLIATYAQLATQVGAKTTIISSDKDLMQLVNKHVSLYDSMKDKHIGISEVIEKWGVMPE
KMIDLQALTGDPTDNIPGIPGIGPKIAAQLLDQFGSLDLLLQRVTEVKQIKRRENIQTYS
EQAKISRELVKLKADVPVDKNLDHFILEPQDGPRLIAFLKAMEFTALTRRVAKETACDAA
VIDALELDIEWKETTYKIDLSSKENNTVLFHDFFENSPQILAQKRKDQALIQKIARDAYK
TILDKEILKEWLLEAQEQGYFSFDTETTSLDPMQAKLVGFSLALQPGKAAYVPLEHVAEE
ENPLGGRRIVPQIETQKALALLKPILENQAVLKIGQNIKYDWLVMKQYNIVMCSFDDTML
LSYALEAGISTHGMDVLSERWLGHKPISYKDLTHSGRKIVSFAQVDLKQATLYAAEDADI
TFRLWQVLKPQLVAQKMTKIYERLDRPLIEILARMEERGILVDRQILSRLSGELAQAALN
LEEEIYQLVGEKFNIASPKQLGDILFGKMGLLGGAKTKSGQWSTSAQTLEELAAEGHILP
RKIIDWRQLTKLKSTYTDALPSYILPTTGRVHTNYSLATTLTGRLSSSEPNLQNIPVRTA
EGRKIRKAFVASKGHLLLSADYSQIELRILAHVADITALKEAFTKGQDIHAMTASQMFGV
AVEGMTSEIRRRAKAINFGIIYGISPFGLASQLGISRKEASDYIQLYFERFPGIEDYMER
TKIFARHHGYVETIFGRRIHYPEIKIAKPQIRALNERAAINAPIQGSAADIIRRAMIQME
NALEKERLSAKMLLQVHDELIFEVPKSESTKTAILIKKVMENATMPALSLSVPLEVKVIA
AQNWDEAH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaatgatcatctttttttggttgatggatcaggctatatttttcgtgcttat
cacgctctaccacctttaaaacgcaaaaaggatggacttcctgtaggagccgtggctggt
ttttgtaacatgctatggaaattactctgtgacgcccgtaataccgctattggtgttgtt
ccaacccatattgctattatttttgactattcatctaatacttttcgtaaggaaatttat
cctcaatataaagccaatcgagcagctcctccagaagatcttatacctcagtttgcactc
atacgacaagcaacaaaagcttttaatttgccttgtatcgaaaaagaaggatttgaagca
gatgatttaattgctacctatgcgcaattagcgacacaggttggagcaaaaacaacaatt
atttcttctgataaagatttgatgcaattagtaaacaaacatgtgtctttatatgatagc
atgaaagataagcatataggtatctctgaagtcatagaaaaatggggtgtaatgcctgaa
aaaatgattgatttgcaggctttaactggagacccaacagataatataccaggtattcca
ggtattggccccaaaattgcagcacaattattagatcagtttggttctcttgatctttta
ctgcaacgcgtgacagaagttaagcaaataaagcgacgtgaaaatattcaaacttatagt
gaacaagcaaaaatttctcgtgaactcgttaaacttaaagcagatgttcctgtagataaa
aacttagatcatttcattttggaaccacaagacggtccacgtttgatcgcttttttgaaa
gctatggagtttacagcactaacacgtcgtgtcgcaaaagagacggcatgtgatgctgcg
gttattgatgcgttagagctagatattgaatggaaagaaactacgtacaagattgatttg
agtagcaaagaaaataatacagttttatttcatgatttttttgagaattctccacaaatt
ttagcacaaaaacgcaaggatcaagctcttattcaaaaaattgcaagagatgcctataaa
actattcttgataaggaaattctaaaagaatggctgttagaagcgcaagagcaaggttat
ttttcctttgatacagaaacaacttctcttgatcctatgcaagcaaagctcgttggtttt
tcattggcgttacaacctgggaaagcagcctatgttccacttgaacatgttgcagaagaa
gaaaatcctttgggaggtaggcgtattgttccacaaattgaaacacaaaaagctttagca
cttttaaaacctatattggaaaaccaagccgtattaaaaattggccagaatataaaatat
gactggttagtcatgaaacaatacaatattgtaatgtgctcttttgacgatacaatgctt
ttatcttatgctttagaggctggaatttcgacacatggtatggatgttttatctgaacgt
tggcttgggcataagccaattagttacaaagatttgactcatagtggaagaaaaatagtc
tcttttgcacaagtagatttgaaacaagctacactatatgcggcagaagacgctgatata
acgtttcgtctatggcaagtattaaagccacagcttgttgcacaaaagatgacaaaaatt
tatgaacgtcttgatcgtccattgatagaaattctcgcaagaatggaagaacgtggaatt
cttgtcgatcgacagattttatcacgcctttcaggagaattggcacaggctgctttaaat
ttggaagaggaaatttatcagcttgttggtgaaaaatttaatattgcttcacccaaacaa
ctaggggatatcctttttggtaaaatgggcttacttggtggtgctaagacgaaaagtggc
caatggtcaacatctgcacaaactttagaagagttagctgctgaaggccatattttacca
agaaaaattattgattggcgccaacttacaaaactaaagtctacctatacagatgcttta
ccttcttatatcttgcctacaactggtcgtgttcatacaaattattccctagcaacaaca
ttaacgggacgattatcatcatcagaacctaatctgcagaatattccagtacgaactgct
gagggacgaaaaatccgaaaagcttttgttgcttcaaaagggcatttattattatcagct
gattatagtcagattgaattacgtattcttgctcatgttgctgatataacggcattaaaa
gaagcatttacaaaaggtcaggatattcatgctatgactgcatcccaaatgtttggagtt
gcagttgaaggaatgacatcagaaatacgtcgacgtgcaaaagctattaattttggtatt
atttatggcatttcgccctttggattagcgagccaattgggaatttcacgtaaggaagct
agcgattatattcaactctattttgaaagatttccaggaatagaggattatatggaaaga
acaaaaatatttgcacgtcatcatggttatgtagagaccatttttggacgtcgtattcac
tatcctgaaataaaaatcgctaaaccacaaattcgtgctttaaatgaacgagctgctatc
aatgcaccaatccaggggtcagcagcagacattattcgccgtgctatgattcaaatggaa
aatgctttagaaaaagaacgattgtcggctaaaatgttattgcaagtccatgatgaactt
attttcgaagtccccaaatctgaaagtacaaaaacagcgattctcattaaaaaagttatg
gaaaatgctacaatgccagcattatctttatctgtaccgcttgaagtgaaagttatagct
gctcaaaattgggatgaggcacattaa
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