Bartonella sp. CDC_skunk: Bcsk_001290
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Entry
Bcsk_001290 CDS
T11834
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bars Bartonella sp. CDC_skunk
Pathway
bars03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bars00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcsk_001290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bars03019
]
Bcsk_001290
03016 Transfer RNA biogenesis [BR:
bars03016
]
Bcsk_001290
Enzymes [BR:
bars01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bcsk_001290
Messenger RNA biogenesis [BR:
bars03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bcsk_001290
Transfer RNA biogenesis [BR:
bars03016
]
Prokaryotic type
tRNA degradation factors
Bcsk_001290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Transposase_mut
Motif
Other DBs
NCBI-ProteinID:
AQX20794
LinkDB
All DBs
Position
complement(166219..168420)
Genome browser
AA seq
733 aa
AA seq
DB search
MFKTHKVEIEWAGRPLILETGKIARQADGAILATYGETVVLATVVSAKTPKPDQNFFPLT
VNYQEKNYAVGKIPGGYLKRESRPSESETLISRLIDRPIRPLFVDGYKNDTQVIVSVIQH
DLENNPDILAIIASSAALTLSGIPFMGPIAAARIGYCNGQYILNPNIDEMPESKLDLVVA
GTENAVLMVESEAHELPEDVMLDAVMFGQKSFQPVINAIIKLAEVAAKEPRDFIPEDLSI
LEKDMLEMVEQDLRDIYTITDKQKRHAALDLLKEEVINKFTQETEKNCEFNTDQIATVFK
QLQAKIVRQNILDTGKRIDGRNLSDVRSIQSEVGILPRTHGSALFTRGETQALVIATLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGEIGRIGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRTVSEITESNGSSSMATVCGTSLALMDAGVPLANPVAGIAMGLIKEGKQFAVL
SDILGDEDHLGDMDFKVAGTENGITSLQMDIKIDGITEEIMKIALAQAKDGRIHILNEMA
KALARARSELSEFSPRIEMMNIPVDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTIKIA
SSDLKTIEAAKNWILSIVDEPEVGAIYQGTVVKIAEFGAFVNFFGSRDGLVHISQLAVER
VAKTTDIVKEGDKVWVKLMGFDERGKIRLSMKVVDQQTGKELIHDDSIETEKGGNIHERN
RSEKKNRRKKKED
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacccataaggtagaaattgaatgggccggccggccacttatcctcgaaaca
ggaaaaattgcacgtcaggcagatggcgcgattcttgctacatatggtgaaactgttgtt
ttggcaactgtcgtttcagcaaaaactccgaaaccagatcaaaatttttttccgctcacc
gttaattatcaagaaaaaaactatgcagttggtaaaatacctggaggttatttaaaacgc
gaaagccgtccaagtgaaagtgagaccttaatttcacggttaattgatcgtccaattcgc
ccgctctttgttgatggttataaaaatgatacacaagtaatcgtttctgtcatccagcat
gatttagaaaacaaccctgatattcttgctataattgcatcttctgccgcactaactctc
tcaggtattccttttatgggcccaattgccgctgctcgtattggttactgcaatggacaa
tatattcttaatcctaatattgacgagatgcctgaatcaaaacttgatctcgttgttgct
ggaacagaaaatgctgtactaatggttgaatcagaagcacatgaattacctgaagatgta
atgttagacgctgtcatgtttggccaaaaaagttttcaacctgtaattaatgcaatcatc
aaacttgccgaagtagctgctaaagagccccgcgactttattccagaggatctatctatc
cttgaaaaagatatgcttgaaatggtcgaacaagatctcagagacatttatacaattact
gataaacaaaaacgtcatgctgcacttgatcttcttaaagaagaagtcatcaataaattc
acacaagaaacagaaaaaaactgtgaatttaatacagatcagattgcaactgttttcaaa
cagttgcaagcaaaaattgttcgccaaaacatccttgatacgggaaaacgcattgatgga
cgaaatctttcagatgttcgctcaattcaatcagaagtaggtattttacctcgcacacac
ggatcagcattatttactcgtggtgaaacacaagcacttgtcatagcaacattaggaact
ggagaagatgagcaatatatagattccttgacaggtatgtataaagaaacatttcttctc
cattacaattttccacctttttcagtaggtgaaataggccgtattggttctcctggccgc
cgtgaaattggtcatggtaaattagcgtggcgtgctattcatcccatgttgccgacaaaa
gaatcatttccttatactattcgtactgtatcagaaattactgaatcaaatggatcttct
tcaatggcaactgtttgtggaacttcactagcactcatggatgcaggtgttcctttagcc
aaccctgttgctggtattgcaatgggtttgattaaagaaggtaaacaatttgccgttcta
tcagatattttaggggatgaagatcaccttggtgatatggatttcaaagtagcaggtaca
gaaaacggaattacttctctgcaaatggacataaaaattgacggtattactgaggagatt
atgaaaatcgcacttgcacaagctaaggatggtcgaatccatattctcaatgaaatggca
aaggccttagctcgtgcacgtagtgaactcagcgaattttctccacgtattgaaatgatg
aatattcctgtagataaaattcgtgatgttattggttctggtggtaaagtaataagagaa
attgtggaaaaaactggagctaaaattaatattgaggatgatggaacaattaaaattgct
tcttctgatttaaaaaccattgaagcagcaaaaaattggatcctttcaattgttgatgaa
cctgaagtcggtgctatttaccaaggaacagttgttaaaattgcagaatttggagcgttt
gttaatttttttggttctcgcgatggacttgttcatatctctcaactcgcggtagaacgg
gtagcaaaaacaactgatattgtcaaagaaggtgataaggtttgggttaaattaatgggc
ttcgatgaacgtggtaaaattcggttatcgatgaaagtcgttgatcaacaaactggaaaa
gagcttatccatgatgactcaatagaaacagaaaaaggcggtaatattcatgaaaggaat
cgatctgaaaagaaaaaccgtcgtaagaaaaaagaagattaa
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