Bartonella sp. CDC_skunk: Bcsk_006650
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Entry
Bcsk_006650 CDS
T11834
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bars Bartonella sp. CDC_skunk
Brite
KEGG Orthology (KO) [BR:
bars00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bars03032
]
Bcsk_006650
03400 DNA repair and recombination proteins [BR:
bars03400
]
Bcsk_006650
Enzymes [BR:
bars01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcsk_006650
DNA replication proteins [BR:
bars03032
]
Prokaryotic type
DNA Topoisomerases
Bcsk_006650
DNA repair and recombination proteins [BR:
bars03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcsk_006650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AQX21311
LinkDB
All DBs
Position
complement(745784..748375)
Genome browser
AA seq
863 aa
AA seq
DB search
MDIVIVESPAKAKTINKYLGSQYKVIASFGHVRDLSAKDGSVLPDKDFAMKWDIDTASAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLKQKKVLNDQRVKRVVFNAITKKSV
LDAMKNPRDIDISLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICNR
ESEIEQFIKEDYWSITTYLKTLQNNIFHARLIEFNHNKLGKLDIQSQEQADQILSMLEKA
NYRTLSIEAKPIKRNPSPPFTTSTLQQAASSKFGFSASRTMQVAQKLYEGVEINGETAGL
ITYMRTDGVQMVSEAIDAARKAIIDSFGRNYLPEKPRFYSTKAKNAQEAHEAIRPTDFTR
HPNQVCNFLDSDQAKLYELIWKRAIASQMCSAEIERTTVEIEASQEENHAHLRATGSVIR
FDGFISAYTDPKEEENSDEDESTHLPQINVGESLTKEKVESVKHTTEPPPRYSESALIKK
LEELGIGRPSTYASTLSTLCDRGYIITDKRKLIPDVKGRIVTAFLENFFNRYVEYGFTAA
LEEKLDLISDGKLSWKDVLRDFWDEFNASITSIQELRIMNVLDVLNVTLAPLAFPTREDG
SDCRSCPLCTNGQLSLKLGRYGAFVGCSNYPECKYTCQLGSDTEEQSKAVHNDEPVMLGI
DPETGKDISLRHGRFGPYIQLGEGKEIKRASLPKGWHIENIDFDKALALLSLPREVGIHP
ETGKIITAAIGRYGPYLAHDGQYTNLFSTDEVFDIGINRAVTILAEKKESTTNRRKITPA
TLATLGDHPEGGLITIRNGLYGPYVNWNKINATLPKDKDPATVTLAEALELILAKASIKK
TKQKATSKKKATPKKSSPRKKKA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatattgttatcgttgaatctccagcaaaagcaaaaacaatcaataaataccttgga
tctcaatacaaagtcatagcatcatttgggcatgtacgtgatttgtctgcaaaagatggc
tctgttcttcctgataaagattttgctatgaagtgggatattgatactgcttcagcaaaa
cgtttgaatgaaatagcaaaagcagtcaaagaagccgatagccttatcttagcaacagac
cctgatcgtgaaggagaagctatttcatggcatatccttgatgttctaaaacaaaaaaaa
gttttaaacgatcaacgtgttaaacgagttgtttttaatgcaatcacgaaaaaatccgtt
cttgatgccatgaaaaatccacgcgatattgatatatcgcttgtagatgcctatcttgca
cgtcgagctctcgactacctggttgggtttactctctcacctgttttatggcgcaaatta
cctggtgctcgttctgctggtcgtgttcaatcagttgctttacgtatcatttgcaatcgc
gaatcagagattgagcaattcattaaagaagactactggtcaattacaacatacttgaaa
acactccaaaataatatttttcatgcacggttaatagaatttaaccataacaaacttggt
aagcttgatattcaatcccaagaacaagctgatcaaattctctctatgttggaaaaagca
aattatcgcacgttaagtattgaagccaagcctataaaaaggaatccttctccacccttt
acaacatctacattacaacaagctgcttcttcaaaattcggtttttcagcttctcgcaca
atgcaagttgctcaaaagctttatgaaggtgttgaaatcaatggtgaaacagcaggactt
attacttatatgcgtactgatggagtgcaaatggtttcagaagctattgatgcagcacga
aaagcgattattgattcttttggaagaaattatcttcctgaaaaaccacgtttttattca
acaaaagctaagaatgcacaagaagcacatgaagctattcgtcctacagattttacacgt
catcctaatcaagtgtgcaattttctcgatagtgatcaagcaaaactctatgaattaata
tggaaacgcgcaattgccagccaaatgtgttctgctgaaattgaacgtacaactgtcgaa
attgaagcatctcaagaagaaaatcacgctcatttacgcgcaacaggctctgttattcgt
tttgatggcttcatttctgcttatacggatccaaaagaagaagaaaatagtgatgaggat
gaatcaacacatcttccgcagattaatgttggagaatcacttacaaaagaaaaagttgaa
tcggtcaaacatacgacagaaccacctcctcgttattctgaatctgcattaattaaaaaa
cttgaagaattgggaattggtaggccttcaacttatgcatctacattaagcacactttgt
gatcgtggatatatcataaccgataaacgcaaacttatccctgatgttaaaggacgtatt
gttacagcctttcttgaaaatttttttaatcgctatgtagaatatggttttacagcagct
cttgaagaaaaattagatcttatatccgatggaaaactttcctggaaagatgttttacgc
gatttttgggatgaatttaatgcatctattacgagtatccaagaactccgcataatgaac
gttcttgatgttttaaacgtaacgttagctcctcttgctttcccgacacgtgaagacgga
agtgattgccgctcttgtcccctttgtacaaatggccaattatcattaaaattagggcgc
tatggtgcattcgttggttgctctaattatcctgaatgtaaatatacatgccaattaggt
tcagatacagaagaacaaagcaaagcggtgcacaatgatgaacctgttatgctcggtatt
gatcctgaaacagggaaagatatttcccttcgtcatggccgctttggtccatatattcaa
cttggcgaaggtaaagaaattaagcgtgcaagtttgcctaaagggtggcacatagaaaat
attgattttgataaagctttagctttgctgtctttacctcgtgaagttggcattcatcct
gaaacaggaaaaataattacagccgcaattggacgatatggtccttatcttgctcatgat
ggacaatacacaaatctttttagtacagatgaagtctttgatatcggcattaatcgcgct
gttacaatacttgctgaaaaaaaagagagtacaacaaaccgacgtaaaataacacctgct
acgctggcaacactaggagatcacccagaaggtggactaattactatacgtaatggtctt
tatggtccatatgttaactggaataaaattaatgctaccttaccaaaggataaagatcca
gctacagtcacacttgcagaagcattagaacttatattagctaaagcatcgataaaaaaa
acaaaacaaaaagctacttcaaaaaagaaggcaacaccaaaaaaatcctcaccccgcaaa
aagaaagcataa
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