Bartonella sp. CDC_skunk: Bcsk_010870
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Entry
Bcsk_010870 CDS
T11834
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bars Bartonella sp. CDC_skunk
Brite
KEGG Orthology (KO) [BR:
bars00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bcsk_010870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bars03021
]
Bcsk_010870
Transcription machinery [BR:
bars03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcsk_010870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
CC2-LZ
Sec8_N
MAL13P1_147_C
MYO15
Motif
Other DBs
NCBI-ProteinID:
AQX21721
LinkDB
All DBs
Position
complement(1228388..1230397)
Genome browser
AA seq
669 aa
AA seq
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MATKVKQKDNVEEMGKVSSDGSLLDFSDDAIKKMMKLAKKNGYVLMDELNAALSSEEFTS
EQIEDILAMFSEMGISVIDDEDEIESGQYEEEITVEGGDLVEATNYAVATTSKREVADRT
DDPVRMYLREMGAVELLSREGEVAIAKRIEAGRETMISGLCESPLTFQALIIWREELQEQ
RILLREIIDLEMTYSGPEAKQAPIIDESEVKKIKEETSSSSMRDMNDLGEEIGGEDDDEE
DDEVNLSLAAMEHELCPQVVETLDFIAETYVKLRELQDQQVESSLSHRKAEPLSSEQRKQ
YTELKDALIQAVKSLSLNQNRIEALVEQLYDINKRLIQSEGKLKRLASNYGIGHEDFLRE
YQGRELDADWVNYIATLSGRGWKEFSTCEAKVIQSLRNEIQNLAQETAISISEFRRIVTQ
VQKGEREANIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRG
YKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELS
SKLSMPLEKVRKVLKIAKEPISLETPVGDEDASHLGDFIEDRNALLPIDAAIQANLRDTT
TRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRS
RKLRSFLDS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacaaaaagataatgtggaagaaatgggcaaagtaagctcggat
ggttctcttcttgatttttccgatgatgctatcaaaaaaatgatgaaacttgccaaaaaa
aatggctacgtgttgatggatgagttgaatgcagctctttcttctgaagaattcacgtct
gagcaaattgaagatatattggcaatgttctctgagatgggtattagcgttatagatgat
gaagatgaaattgaatctggacaatatgaggaagaaattacagtagaaggtggcgattta
gtagaagccacaaattatgcggttgcaacaacatctaaacgtgaagtagccgaccgaact
gatgatccagttcgtatgtatttgcgtgaaatgggagccgttgaattactctcgcgtgag
ggtgaggttgctatcgctaaacgtattgaggctggacgtgaaacgatgatttccggtctt
tgtgagagccctttaacatttcaagctttaattatttggcgtgaagagttgcaagagcag
cgtattcttctgcgtgaaattattgatcttgagatgacttattctggtccagaagcgaag
caggctcctattattgatgaaagtgaagtcaaaaaaataaaagaagaaacatcatcttct
agcatgcgtgatatgaatgatcttggagaagagatagggggcgaagatgatgacgaagaa
gatgacgaagttaatttatcgcttgcagcaatggagcatgagttgtgtcctcaggttgtg
gagactttagattttatcgctgaaacttatgtaaaattacgtgagctacaagatcaacaa
gttgaaagcagtttatcacatcgtaaggcagaacctctttcatcggaacaaagaaaacaa
tatactgaattgaaagatgctttaatccaagcagtaaaatctctttctttaaatcaaaac
cgtattgaggcattagttgagcaattatatgatatcaataagcggttgatacagagcgaa
ggtaagttgaagaggcttgctagtaactatgggattgggcatgaagatttcttaagagaa
tatcaaggtcgtgaattggacgctgattgggttaattatattgcaactttatcaggacgt
ggttggaaagaattttcaacttgtgaagctaaagtcattcagagtttgcgtaatgaaata
caaaatctcgcgcaagaaactgctatttcaattagtgaatttcgtcgaattgttacgcaa
gtacagaaaggggagcgtgaagcgaatatcgctaaaaaggaaatggtggaagctaatttg
cgtcttgttatttccattgctaaaaaatacactaatcgtggtttacaatttcttgatctt
attcaggaaggcaatatcggtttgatgaaggccgttgataaattcgaatatcggcgtgga
tataagttttcaacttatgcgacgtggtggatacgtcaagcaattacacggtctatcgct
gatcaggcacggactattcgtattcctgttcatatgattgagacaattaataaaattgtt
cgtacatcacgccaaattttacatgaaattggacgtgaaccaacaccagaagaactttct
agcaagctttctatgccgttagaaaaagtacgaaaagtacttaaaattgcgaaggaacct
atctcacttgaaacacctgttggtgatgaagatgcttctcatttaggtgattttattgaa
gatagaaatgcattgttaccaattgatgcggctattcaggctaatttacgagatacaaca
acgcgcgttcttgcttcattaacaccacgtgaggagcgtgttttaagaatgcgttttggt
attggaatgaatactgatcatacattagaggaagttggccaacaattttcagtgacccgc
gagcgtattcgtcagattgaagcaaaggcacttcgtaagttgaaacatcctagccgttca
cgcaaattacggagctttcttgattcttaa
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