Bartonella sp. JB15: BJB15x_002130
Help
Entry
BJB15x_002130 CDS
T05113
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bart
Bartonella sp. JB15
Pathway
bart02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bart00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJB15x_002130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bart03021
]
BJB15x_002130
Transcription machinery [BR:
bart03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJB15x_002130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sec8_N
CC2-LZ
Motif
Other DBs
NCBI-ProteinID:
AQX27628
LinkDB
All DBs
Position
231935..233941
Genome browser
AA seq
668 aa
AA seq
DB search
MATKVKQKDSIEEMSKVSSDGPLLDFSDDAIKKMIKLAKKNGYVIMDELNAALSADEFTS
EQIEDTLAMFSEMGINVIDDEDEIDAEQYEEEIAIEGGDLVEATSYAVATTSKREVADRT
DDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMISGLCESPLTFQALIIWREELKEQ
RILLREIIDLEMTYAGPEAKQAPIIEQSEVKKIKEETPSSSMRDMDDVEEDIEEEDDDED
DEVNLSLAAMENELCPQVVETLDFIAETYVKLRKLQDQQVESSLSYRKEKPLSSAQRKQY
TQLKDDLIQAVKSLSLNQNRIEALVEQLYDINKRLIHSEGKLKRLASNYGIGHEDFLREY
QGRELDADWVNYIAALSGRGWKEFSTCEAKVIQSLRSEIQNLAQETAISIGEFRRIVTQV
QKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGY
KFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSN
KLSMPLEKVRKVLKIAKEPISLETPVGDEDASHLGDFIEDRNALLPIDAAIQANLRDTTT
RVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSR
KLRSFLDS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacaaaaagatagtatagaagaaatgagcaaagtgagctctgat
ggtcctcttcttgatttttccgatgatgctatcaaaaaaatgattaagctcgccaaaaaa
aatggctacgtgataatggatgaattgaatgcagctctttctgctgacgaattcacctct
gagcaaattgaagatacattggcgatgttttctgagatgggcattaatgttatagatgat
gaagatgagattgatgctgagcaatatgaggaagaaatcgcaatagaaggtggcgattta
gtagaagcaacgagctatgcagttgcaacaacatctaagcgtgaggtagctgatcgaact
gatgatccggtccgtatgtatttacgtgaaatgggggctgttgagctactctcacgtgaa
ggtgagattgctattgctaaacgtattgaggctggacgtgaaacaatgatttctgggctt
tgtgagagtcctttaacatttcaggctttaatcatttggcgtgaagagttgaaagaacag
cgtattcttcttcgtgaaattattgatcttgagatgacttacgctggtccagaagcaaag
caagcccccattatcgagcagagtgaagtaaaaaagataaaagaggaaacaccatcttct
agtatgcgtgatatggatgatgtggaagaagatatagaggaggaagatgatgacgaagat
gatgaagttaacttatcgcttgcggcaatggaaaatgaattatgccctcaggttgtagaa
actttagactttattgctgagacttatgtaaaattacgcaaactgcaagatcaacaagtt
gaaagcagtttatcatatcgcaaagaaaagcctctttcatctgctcaaagaaaacaatat
actcaattgaaagatgatttaatccaagcagtaaaatctctttctttgaatcaaaaccgt
attgaggcattggttgaacaactttatgatatcaataagcgtttgatacatagcgaaggt
aagctgaagcggcttgctagtaactatgggattgggcacgaagatttcttaagagaatat
caaggtcgtgagttagacgcagattgggttaattatattgcagctttatcagggcgtggt
tggaaagagttttcaacttgtgaagccaaagttattcagagtttgcgtagtgaaatacaa
aatcttgcgcaagaaactgctatttcaattggtgaatttcgtcgaattgttacacaagta
cagaaaggggagcgtgaagctgctatcgctaaaaaagaaatggtggaagctaatttgcgt
cttgtgatttcaattgccaaaaaatacactaatcgtggtttacaatttcttgatcttatt
caagagggcaatatcggtcttatgaaggctgttgataaatttgaatatcgccgtggatat
aaattttcaacttatgcgacatggtggattcgtcaagcaattacacgttctattgctgat
caggcacgtaccattcgcattcctgttcatatgattgagacaattaataaaatagttcgt
acatcgcgccaaattttacatgaaattggacgtgaacctacgccagaggaactctctaac
aaactttctatgccattagaaaaagtgcgaaaagtgcttaagattgcgaaagaacctatt
tcacttgaaactcctgttggtgatgaagatgcttctcatttaggtgattttattgaggat
agaaacgcgttattaccaattgatgcggctattcaagctaatttgcgagatacaacaacg
cgtgttcttgcttcattaacgccgcgtgaagaacgtgttttacgaatgcgttttggtatt
ggaatgaacactgatcatacattagaagaagttggtcaacaattttcagttacccgcgag
cgtattcgtcaaatcgaagcaaaggcacttcgtaagttgaagcatcccagccgttcacgc
aaattacgcagttttcttgattcttaa
DBGET
integrated database retrieval system
