Bartonella sp. JB15: BJB15x_003640
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Entry
BJB15x_003640 CDS
T05113
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bart
Bartonella sp. JB15
Pathway
bart03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJB15x_003640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bart03400
]
BJB15x_003640
Enzymes [BR:
bart01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BJB15x_003640
DNA repair and recombination proteins [BR:
bart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJB15x_003640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AQX27776
LinkDB
All DBs
Position
complement(405950..406618)
Genome browser
AA seq
222 aa
AA seq
DB search
MNSKSTSLCPEPPPNCNLCPRLNNFIADWRIKEPHWHNAPVSPFYPHKGAATTRLLIVGL
APGLRGANRTGRPFTGDYAGHLLYSTLKKFGFAQGTFAERSDDTLELIDAAIVNSVRCVP
PDNKPTGAEINTCRHFFSPLLTNLPKLKAIITLGSIAHNSTIRALNAKILTHPFGHGKVS
DIGRLRIFSSYHCSRYNTNTGRLTDTMFHQIFQTARIYLNQC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaaatcaacatcattgtgcccggaaccacctccaaattgtaatttgtgtccc
cgcctaaacaactttatcgctgattggcgcattaaagaaccccactggcataatgcacct
gtaagtccattttaccctcataaaggagctgcaacaacacgtcttcttatcgtcggactt
gctcctggattacgtggagcaaacagaactggacgtcctttcacaggcgattatgctggc
catctcctttattccactttaaaaaaatttggttttgctcaaggtaccttcgcagaaaga
tcagacgataccctcgagctcattgatgcagcaattgttaattcagtgcgttgtgtccca
ccagacaataaacccactggtgctgagatcaacacttgccggcattttttttcacctctt
ttaacaaaccttcctaaactcaaagccatcattactcttggtagtattgctcataactcc
actatacgagctttaaacgcaaaaatcttaacgcacccctttggtcatggaaaagtcagt
gatatcggtagattacgtatcttttcaagctatcactgttcacgctataatactaacact
ggccgtttgacagatactatgttccatcaaatcttccaaacagcaagaatatatttaaat
caatgttga
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