Bartonella sp. JB15: BJB15x_005340
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Entry
BJB15x_005340 CDS
T05113
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bart
Bartonella sp. JB15
Brite
KEGG Orthology (KO) [BR:
bart00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bart03016
]
BJB15x_005340
Enzymes [BR:
bart01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BJB15x_005340
Transfer RNA biogenesis [BR:
bart03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJB15x_005340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
STATB_N
DUF5745
Motif
Other DBs
NCBI-ProteinID:
AQX27943
LinkDB
All DBs
Position
complement(602421..603572)
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AA seq
383 aa
AA seq
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MKLITTTTDLEIAIAALRNSNFVTVDTEFIRETTFWPQLCLIQVASPDITTLIDPMVQDI
NLQSFFDLMIDKKVVKVFHAARQDIETIYHLGGVIPSPLFDTQIAGSICGFGDSISYDQI
VQRCTGHHLDKSSRFTDWSCRPLSEKQLLYALADVTYLRNVYLTLKKQLEEKKRTHWMND
EMAILLAPTTYDMPENEAWKKVKGRITKKRQFAVLQKIAAWREHEARKYNTPRRHIMKDE
CLIEIAIQQPKDESALKHLSSINKNWNRLSNIQTLIKAIHEGLEVDLATLPALPKYTPVD
DKIAVTIDLLKILLKLVANENNITPKIIATSNDLKKIANGTITQNIPAMNGWRYEIFGHK
AEQMLKGEIAFYFNNGEVKIKKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttattacaaccacaacagatcttgaaattgctattgccgctttgcgcaattct
aattttgtaacggtagatactgaatttatccgtgaaacaaccttctggcctcagttgtgc
ttaatccaagttgcatcaccagatattacgacacttattgatccgatggtgcaagatatt
aatctacaatcattttttgatctgatgatcgataaaaaagttgtcaaagtttttcacgct
gcgcgccaagatatcgagactatttaccatcttggcggagttattccttctcctctcttt
gacacacaaatagcaggatcaatctgtggattcggtgattctatctcctatgatcaaatt
gtacaacgttgcactggacatcatcttgataaatcatctcgttttacagattggagctgt
cgtcccctttctgaaaaacagctactctatgcactcgccgatgttacctatctaagaaac
gtttatctcacattaaaaaagcagttagaggaaaaaaagcgtacccattggatgaatgat
gaaatggcaatcctcttagcaccaacaacctatgatatgccggaaaatgaagcatggaaa
aaggtgaaaggaagaatcacaaaaaaacgtcaatttgctgtattgcaaaaaatagcagct
tggcgtgaacatgaagcacgcaaatataatactcctcgtcgtcacattatgaaagatgag
tgtcttattgaaatcgcaatccaacaaccaaaagatgaatctgctctgaaacatttaagt
agcattaacaaaaactggaatcgtctatcaaatatacagacattaattaaagctatacat
gaaggcttagaagttgatcttgctacgctaccagctcttcctaagtacactcctgttgat
gataaaatagctgttacaattgatcttcttaaaatattattaaagcttgttgcaaatgaa
aataatatcacacctaaaattatcgcaacatctaatgatttaaaaaaaattgctaatggt
actataacacaaaatattcctgctatgaatggctggcgttacgaaatttttggtcataag
gcagaacaaatgctaaaaggcgagatagcattttatttcaataatggagaagtaaaaatc
aagaaactttaa
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