Bartonella sp. JB15: BJB15x_005610
Help
Entry
BJB15x_005610 CDS
T05113
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bart
Bartonella sp. JB15
Pathway
bart03410
Base excision repair
bart03430
Mismatch repair
bart03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJB15x_005610
03430 Mismatch repair
BJB15x_005610
03440 Homologous recombination
BJB15x_005610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bart03400
]
BJB15x_005610
DNA repair and recombination proteins [BR:
bart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BJB15x_005610
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJB15x_005610
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJB15x_005610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
QRPTase_C
CDC45
Motif
Other DBs
NCBI-ProteinID:
AQX27968
LinkDB
All DBs
Position
628464..630248
Genome browser
AA seq
594 aa
AA seq
DB search
MQRSRYLLNIQSSACGQVWVDALDVERVNNARAISQKFGLPDQLARVLAVRGVDESEAIT
FINPTLRTLMPNPKDFIDMHCAAERLVKAIINREKIAVFGDYDVDGACSAALLARFLHCF
GIIVKIYIPDRVIEGYGPNEQAMKGLVQEGASLIITVDCGANSPAAIKAARCAGADVIVL
DHHQMENVHEEAVALVNPNRPDDFSEQGHLCAAGVVFITLMWVNRLLREKKWGGALPDLL
SMLDLVALATICDVVPLQGVNRAFVVKGLQVARFMHNPGIAALAKVAHIGEPLNSFHFGF
LLGPRINAGGRIGNQALGTYLLSCNDRDEADRIAQQLDQLNKERQEMEMIQLAQAEVYID
SIYQGEAIPSSFVIAHKEWHPGIVGILAARLKERFFCPVLAIALKENGIGIGSGRSITGI
DLGALVHEAVALNLLEKGGGHSMAAGFTIQSRKIEIFRKWLEEKVSLMVSQLRAEKSLSI
DGFLSASGANKDLFDMIEKAGPFGSGNAKPVFVFPSHRLVNVYEVGKGNLRLVISDIEGK
KLQGIAFGAVGTSLGKFLSENIGKTIHLAGNLSLNYWRESVNPQLRVIDAATVI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgatctcgttatttacttaatattcaatcctcggcttgcggtcaggtttgggtt
gatgctcttgatgtggagagggttaataatgctcgtgctatttctcaaaaatttggttta
ccggaccaacttgctcgagttcttgcagtaagaggtgtcgatgaatccgaagctattact
tttattaatccaacgttacgtactttaatgcctaatccaaaagattttatagatatgcac
tgtgcagcggagcgtttggttaaagctattataaaccgagaaaagattgctgtttttgga
gattatgatgttgatggtgcttgttcagcagcgcttttagcacgttttttacattgtttt
ggcataatagtaaaaatttatattcctgatcgtgttattgagggttatggtccaaatgaa
caagcaatgaaaggattggtacaagaaggggcgagtttaattattaccgttgattgtggt
gcgaatagtccagccgcaataaaagcagctaggtgtgcgggtgctgatgttattgtttta
gatcatcatcaaatggagaatgttcacgaagaagctgttgcccttgttaatcctaatcgt
cctgatgatttttctgagcagggacatttatgtgctgcgggtgttgtatttattacattg
atgtgggttaatcgtttattgcgggagaaaaaatggggaggagcgcttcctgatctttta
agtatgcttgatcttgttgcattggctactatatgcgatgtagttccattacaaggtgtt
aatcgtgcttttgtagttaaagggcttcaggtagcacgttttatgcataatcccggaata
gctgctttagcaaaggttgcgcatataggagaaccactcaatagttttcatttcggtttt
ttattgggacctagaattaatgcggggggacgtattggaaatcaggccttaggtacatat
ttgctcagctgtaatgatagagatgaagcagatagaatagcacaacaactggaccagctt
aataaagaacgtcaagaaatggaaatgattcaattagctcaagcagaagtttatattgat
tctatttatcaaggtgaagcaataccgtcatcatttgtgattgctcataaagaatggcat
ccaggtatcgttggtattcttgctgcccgtttaaaagaacgttttttttgtcctgtttta
gcaatagctttgaaagaaaacggaattggtattggatcgggtcgttcaattactggtata
gatttgggagcgcttgtgcatgaagcagttgcattaaacttattagaaaagggtggggga
catagtatggcggcagggtttacaattcagtcgagaaaaatcgaaatttttcgtaaatgg
ttagaagagaaagtatctttaatggtttcacaattacgtgctgaaaaatctcttagtata
gatggttttctttctgcttctggtgcgaataaagatctttttgatatgattgaaaaagca
ggtccttttggctcagggaatgctaaacctgtttttgtttttccttctcatcgcttagtt
aatgtatacgaggttggaaaaggcaatttgcgccttgttatttctgatattgaaggcaaa
aaattgcaaggaatcgcttttggtgcggtaggaacatcgcttggtaagtttctttctgaa
aatattggtaagacaatccatttagctggtaatttaagtttgaattattggagggaaagc
gtaaatccacaattacgtgttatcgatgcagccacagtaatttga
DBGET
integrated database retrieval system
