KEGG   Bartonella sp. JB15: BJB15x_007470
Entry
BJB15x_007470     CDS       T05113                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bart  Bartonella sp. JB15
Pathway
bart03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bart00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BJB15x_007470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bart03021]
    BJB15x_007470
   03400 DNA repair and recombination proteins [BR:bart03400]
    BJB15x_007470
Enzymes [BR:bart01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BJB15x_007470
Transcription machinery [BR:bart03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BJB15x_007470
DNA repair and recombination proteins [BR:bart03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BJB15x_007470
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Biotin_lipoyl_2 Apocytochr_F_C ApbA_C
Other DBs
NCBI-ProteinID: AQX28145
LinkDB
Position
complement(823614..827822)
AA seq 1402 aa
MNHEVMNLFNPQAPVQIFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVVHIWFLKS
LPGRISTLLDLTLKDIERVLYFENYIVTEPGLTSLKLHQLLSEEEYMLAIDEFGEDQFSA
MIGAEAIYELLAGMELDKIANDLRAELTETTSELKQKKLIKRLKIVENFLESGNKPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
VQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYAQLDAKGYSSTVKQAKRLVEKEHPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVSEKEPGEGMAFADMGELHHALE
NKVVTLHTKIKGRFKDINKDGEVVSKLYDTTPGRLIIGELLPKNPNISFDIVNQEMTKKN
ISKMIDQVYRHCGQKETVIFCDRIMQLGFSHACRAGISFGKDDMVIPDSKSRLVAETEAL
AKEYEQQYSDGLITQGEKYNKVVDAWGKCTDRVADEMMKRIQAVEFDSKTGRKRQMNSIY
MMSHSGARGSTNQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISAIDCGTVKGLTMQPIVDSGQIVASLGQRILGRT
ALLDILHPVSGELILEGGAMIEESDVAKIEEAGIQSIQIRSALTCETRLGVCAKCYGRDL
ARGTLVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYFEASYDGKIEIRNRN
VVRNSEGHLVVMGRNMAILIKDESGKERVVHRISYGARIFVDDGDVVKCGQRIAEWDPYT
RPILTEVDGYIGFEDMVDGLSVTETADESTGITKRLVIDWRANPRGAELKPAIVIHTDEK
GETVAKLYKGGEARYMMSIETILSVEPGSYVKAGDVIARLPMESAKTKDITGGLPRVAEL
FEARRPKDHAIIAEISGTVRFGRGYKNKRRIIIEPHDESLEPVEYLIPKGKLFHLQEGDQ
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK
VEITEPGDSGYILGDHVDRIELDEINDNLIAEGKRPAVGNPILLGITKASLQTPSFISAA
SFQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGGTIAQIRRIATVRDDLIVNER
RKSSDGETAKAMLTNMTANTAE
NT seq 4209 nt   +upstreamnt  +downstreamnt
atgaaccacgaggtcatgaatcttttcaatcctcaggcaccagtgcagatattcgactct
attcgtatttcaattgcgagtcctgagaagattctgtcttggtcgtatggtgaaattaaa
aaaccagaaactatcaactaccgaacatttaagccagagcgtgatggtcttttttgtgca
cgtatatttggtcctattaaagattatgaatgtttatgtggaaaatataaacgtatgaaa
tataagggtattatctgtgaaaaatgtggcgtagaagtcactctttcacgggtacgtcgt
gaacgcatggggcatattgagcttgcagctccagtggttcatatttggttccttaagtca
ttacctggtcgtatttctactcttttagatttgactttaaaagatatcgaaagagttctt
tattttgaaaattatattgtcacagaaccagggttgacatctcttaagttacatcagctt
ctttctgaagaagaatatatgcttgctattgatgaatttggggaagaccaattttcagct
atgattggtgcagaggctatttatgaacttcttgctgggatggagttagataaaattgca
aatgatttgcgtgctgaattgactgagacaacttcggagttaaaacagaaaaaactgatt
aaaagacttaaaatcgttgagaatttccttgaatctggcaataaaccagagtggatgatt
atgaaaactattccagttattccaccagatttacgtccattagttccattagatggtggt
cgttttgcaacatcagatttgaacgatctctatcgacgtgttatcaatcgtaacaaccgt
ttaaagcgattaattgagctacgtgctcctggaattattgtccgcaatgaaaagcgtatg
gtacaagaagctgttgatgcattatttgataatggtcgtcgcggacgtgtaattactggg
gcaaataagcgtccattaaaatcgctttcagatatgctaaaaggtaagcaaggacgtttc
cgtcaaaatctacttggaaagcgtgttgattattcaggtcgctctgttatcgtgacaggt
cctgaattgaaattacatcaatgtggtcttccgaaaaaaatggctctcgaattatttaag
ccttttatttatgcgcaacttgatgcaaagggttattcatctactgtcaaacaggccaag
agacttgttgaaaaggaacatcctgaagtttgggatatcttagatgaggttattcgtgaa
catcctgttttgctgaatcgtgcaccgacgcttcatcgcttaggaattcaggcttttgaa
cctattttgattgaagggaaagctatacaacttcatccgttagtgtgtacagcgtttaat
gcggattttgacggtgatcagatggctgttcacgttcctctttctcttgaggcacagctt
gaagctcgtgttttgatgatgtcaaccaataatattcttcacccagctaatggtgctccg
attattgttccatcacaggacatggttcttggtctttactacctttccattgtttctgaa
aaagagccgggtgaaggaatggcttttgcagatatgggtgaattgcatcacgctttggaa
aataaagttgtaaccttgcatacaaaaattaaaggccgttttaaagatatcaataaggat
ggtgaagttgtttccaaactctacgatacaacacctggtcgtttaattattggtgagctt
ttaccaaaaaatcctaatatttcatttgatattgttaatcaggaaatgaccaaaaagaat
atttctaaaatgattgaccaagtttatagacactgtgggcagaaagagacagtgattttc
tgtgaccgtatcatgcagcttggtttttcgcatgcttgtcgtgctggaatttcatttggt
aaagatgatatggttattcctgatagtaaatctcgtctagtagcggaaacggaagctctt
gctaaggaatatgagcaacaatatagtgatggtttaattacccaaggtgagaaatataac
aaagtcgttgatgcttggggtaaatgtaccgatcgtgttgccgatgagatgatgaagcgt
attcaggcagttgaatttgattctaaaacaggtcgtaaacggcaaatgaattcaatttat
atgatgtcgcattctggtgcgcgtggttctactaatcagatgagacaattggctgggatg
cgtggattgatggcaaagccgtcgggtgaaattattgaaacgcctatcatttctaatttt
aaagaaggtttgactgttaatgagtacttcaattcaactcatggtgcacgtaaaggactt
gctgatactgcattaaagactgctaactctggttatcttacgcggcgtcttgttgatgtt
gcacaagatgctattatttcagcgattgattgtggtactgtaaaaggtcttactatgcag
ccaattgttgattcaggacaaattgttgcttctcttggtcagagaattcttggtcgtacg
gcgcttcttgatattttgcatccggtttctggtgagcttatccttgagggtggtgcaatg
attgaagaatctgatgttgctaagattgaagaggcaggaattcagtctattcaaatacgt
tctgctttgacctgtgagactcgtctcggtgtttgcgctaagtgctatggtcgtgattta
gcacgtggaacattggttaatcagggggaggcagtgggtgttatcgcggctcagtcaatt
ggggagccaggaactcagcttacgatgcgtactttccacttaggtggaacagcgcaggtt
gttgactcatcttattttgaagcgtcttatgatggtaagatagaaattcgtaaccgtaat
gtggttcgaaattctgagggccatttggtagttatggggcgcaatatggctattctgatt
aaggatgaatctggcaaagaacgtgttgtacatcgcattagttatggtgcacgcatcttc
gttgatgatggtgatgttgtaaaatgtggacagcgtattgcagagtgggatccttataca
cggccaattttaactgaggttgatggttatataggtttcgaagatatggttgatggttta
tcagtcacagaaacagctgatgaatctacaggtattactaagcgtttggttattgattgg
cgtgctaatccacgtggtgccgaattaaaaccagcaattgtcattcatacagatgagaag
ggtgaaactgttgctaaattatataaagggggtgaggctcgttatatgatgtcgatagag
acgattctctctgttgaacctggttcctacgttaaggcaggtgatgttattgcacgcttg
ccaatggaaagtgctaaaactaaagatattacgggtggtttgccacgtgtcgctgaactc
tttgaagcacgtcgtccaaaagatcatgctattattgctgaaattagtggtacagttcgg
tttggtcgtggttacaaaaataagcgccgtattatcattgaaccacatgatgaatccctt
gaaccagtggaatatttaattccgaaaggtaaattatttcatttgcaggaaggtgatcag
attgaaaaaggtgattatatccttgatggtaatccagcacctcatgatattttagcgatt
aaaggtgttgaagctttggcgtcttatcttgttaatgaaattcaggaagtttatcgtttg
caaggtgttttgatcaatgataagcatattgaagtgattgttcgccagatgttgcaaaag
gttgaaattacggaacctggtgattctggttatattttaggtgatcatgttgatcgcatt
gaattagatgaaatcaatgataatctgattgccgaaggtaaaagacctgcagtaggtaat
cctatacttcttgggattacaaaagcatctcttcagacgccctcttttatttcagcggcg
tcatttcaggaaacaacgcgtgtgctcactgaagcagcagtttcaggaaaaattgatact
ttgcaagggcttaaggaaaatgttattgttggtcggcttatacctgcgggtacgggcggt
acgattgcccaaattcgtcgtattgctactgttcgtgatgatctgattgtgaatgagcgc
cgcaaatccagtgatggtgaaaccgcgaaagctatgttaacaaatatgacggctaatact
gctgagtga

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