Bartonella sp. JB15: BJB15x_012310
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Entry
BJB15x_012310 CDS
T05113
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bart
Bartonella sp. JB15
Pathway
bart03030
DNA replication
bart03410
Base excision repair
bart03420
Nucleotide excision repair
bart03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJB15x_012310
03410 Base excision repair
BJB15x_012310
03420 Nucleotide excision repair
BJB15x_012310
03440 Homologous recombination
BJB15x_012310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bart03032
]
BJB15x_012310
03400 DNA repair and recombination proteins [BR:
bart03400
]
BJB15x_012310
Enzymes [BR:
bart01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJB15x_012310
DNA replication proteins [BR:
bart03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BJB15x_012310
DNA repair and recombination proteins [BR:
bart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BJB15x_012310
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJB15x_012310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AQX28601
LinkDB
All DBs
Position
1359550..1362453
Genome browser
AA seq
967 aa
AA seq
DB search
MKAKDHLFLVDGSGYIFRAYHALPPLKRKKDGLPVGAVAGFCNMLWKLLCDARNTAIGVV
PTHVAIIFDYSSNTFRKQIYPQYKANRAAPPEDLIPQFELIRQATKAFNLPCIEKEGFEA
DDLIATYAQLATQVGAKTTIISSDKDLMQLVNTHVSLYDGMKDKHIGISDVIEKWGVMPE
KMVDLQALTGDPTDNVPGVPGIGPKIAAQLLDQFGSLDLLLQRVTEIKQIKRRENIQAYS
EQAKISRELVKLKTDVPIDKSLDHLFLEPQNGPRLIAFLKAMEFTALTRRVAKETSCDAA
VIDALDININWEETTCEADLGIKNNKALFHDFFENSPQILARKRKNQARTQKITRDSYKT
ILDEEILKEWLLAAEEQGYFAFDTETTSLDPMQAKLVGFSLALQPGKAAYIPLEHVAGGN
DLLGGGRIVSQIETQKALALLKPVLENQAILKIGQNIKYDWLVMKQHDIVMRSFDDTMLL
SYALEAGISTHGIDVLSERWLGHRPISYKDLTYNGKKIVSFAQVDLKQATLYAAEDADIT
LRLWKVLKQELVAQRMTKIYERLDRPLIEILARMEKRGILVDRQILSRLSRELAQAALNL
EEEIYQLVGEKFNIASPKQLGNILFGKMGLPGGTKTKNGQWSTSAQTLEELAAEGYILPR
KIVDWRQLAKLKSTYTDALPSYILPKTGRVHTNYSLATTSTGRLSSSEPNLQNIPIRTAE
GRKIRSAFIASEGHVLLSADYSQIELRILAHVADIAALKEAFSQDQDIHAMTASQMFGVA
VERMPSDIRRRAKAINFGIIYGISSFGLANQLGISRKEASNYIQLYFERFTGIKDYMEKT
KMFARHHGYVETIFGRRIHFPEIKIANPQIRAFNERAAINAPIQGSAADIIRRAMIQMES
ALEKEKLSAKMLLQVHDELIFEVPKSESTRTAILVKKVMENATMPALSLSVPLEVKVVVA
QNWDEAH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaaagaccacctttttttagttgatggatcaggttatatctttcgcgcttat
catgctctaccacctttaaagcgtaaaaaagacggacttcctgtaggagctgtcgctggt
ttttgtaatatgttatggaaattactttgtgatgctcgtaatacagctattggtgttgtt
ccaacccatgttgctattatttttgattattcatctaatacatttcgtaaacaaatttat
cctcaatataaagctaatcgagcagcacctccagaagatctcattcctcagtttgagcta
atacgacaagcaacaaaagcttttaatttaccttgtatcgaaaaagaaggatttgaagca
gatgatttaatcgctacctatgctcaattagcaacacaagttggagcaaaaacaactatt
atttcttctgataaagatttgatgcaattagtaaacacacatgtatctttatatgatggc
atgaaagataaacatataggtatttctgatgtcatagaaaaatggggtgtaatgcctgaa
aaaatggttgatttgcaagctttaactggagatccaacagataatgtaccaggcgttcct
ggtattggcccaaaaattgcggcacaattattagatcaatttggttctcttgacctttta
ttgcaacgtgtgacagaaattaagcaaataaaacgacgtgaaaatattcaagcttatagt
gagcaagcaaaaatttctcgtgaactagttaaacttaagacggatgtccctatagataaa
agcttagatcatctttttttagaaccacaaaacggtccacgtttaattgcttttttgaaa
gctatggagtttacagcactaacacgtcgtgtagcaaaagagacatcttgtgatgcagca
gttattgatgcattggatataaatattaattgggaggaaactacgtgtgaggctgatttg
ggtatcaaaaataataaagccttatttcatgatttttttgaaaattctcctcagatttta
gcgcgaaaacgcaagaatcaagcccgtactcaaaaaattacaagagattcctataagact
attcttgatgaagaaattctaaaagagtggttgttagcagcagaagagcaaggttacttt
gcttttgatactgaaacaacctctcttgatcctatgcaagcaaagcttgttggtttttca
ttggcgttacagcctggaaaagcggcttatatcccacttgaacatgttgcaggaggaaat
gatcttttgggaggtgggcgcattgtttcacaaattgagacacaaaaagctttagcactt
ttgaaaccggtattagaaaatcaagcaatattaaaaattggtcaaaatataaaatatgat
tggttagtgatgaagcaacacgatattgtaatgcgttcttttgatgatacgatgctttta
tcttatgctttagaagctggaatttcaacccatggtatagatgttttatctgaacgttgg
cttgggcataggccaattagttataaggatttgacttataatggaaaaaagatagtctct
tttgcacaggtggatttgaaacaggcgactctatatgcagctgaagacgctgatataaca
cttcgtttatggaaagtgttaaaacaagaacttgtagcacaaagaatgacgaaaatttat
gaacgtcttgatcgcccattgatagagattctcgcaagaatggaaaaacgcggaattctt
gtcgatcgccagattttatcacgtctttcaagagagttagcacaggctgctttaaatctg
gaagaggaaatttatcagcttgttggtgaaaaatttaatattgcttcaccaaaacaattg
ggaaatatactttttggtaaaatgggtttgcctggtggtactaaaactaaaaatggccaa
tggtcaacatcggcacaaactttggaagagttagctgctgaaggctatattttaccaaga
aaaattgttgattggcgtcaacttgcaaaactaaaatctacctatacagatgctttacct
tcctatattttgcctaaaacaggtcgtgttcacacaaattattctctagcaacaacatcg
acagggcgattatcgtcatcagaacctaatctgcagaatattccgatacgaactgctgag
ggacgaaaaatccgatcagcttttattgcttcagaaggacatgtattgttatctgctgat
tatagccagattgaattacgtattcttgcgcatgttgctgatatagcagcattaaaagaa
gctttttcccaagatcaggatatccacgctatgactgcctcccaaatgtttggagttgcg
gttgaaagaatgccttcagatatacgtagacgtgcgaaagccattaattttggtattatt
tatggtatttcgtcttttggattagcaaatcaattaggaatttcccgaaaggaagctagc
aattatattcagctctattttgaaagatttacaggaattaaagattatatggaaaaaaca
aaaatgtttgcgcgtcatcatggttatgtggagaccatttttggtcgtcggatacacttc
cctgaaataaaaatagctaatccacaaattcgtgcctttaatgaacgagctgctatcaat
gcaccaatacaggggtctgcagcagatattattcgtcgtgctatgattcaaatggaaagt
gctttagaaaaagaaaaattgtccgctaaaatgttattgcaagtacatgatgaacttatc
ttcgaagtacccaaatccgaaagtacaagaactgcgattcttgttaaaaaagttatggaa
aatgctacaatgcccgcattatctttatctgtaccgcttgaagtgaaagttgtagtagct
caaaattgggatgaagcacattag
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