Bartonella sp. WD16.2: BWD162_007520
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Entry
BWD162_007520 CDS
T05203
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
barw
Bartonella sp. WD16.2
Pathway
barw03030
DNA replication
barw03430
Mismatch repair
barw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
barw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWD162_007520
03430 Mismatch repair
BWD162_007520
03440 Homologous recombination
BWD162_007520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barw03032
]
BWD162_007520
03400 DNA repair and recombination proteins [BR:
barw03400
]
BWD162_007520
Enzymes [BR:
barw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BWD162_007520
DNA replication proteins [BR:
barw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BWD162_007520
DNA repair and recombination proteins [BR:
barw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BWD162_007520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AQX19869
UniProt:
A0A1S6WUA4
LinkDB
All DBs
Position
complement(858144..861632)
Genome browser
AA seq
1162 aa
AA seq
DB search
MPAKKGKILNSKNSLPRFIHLRVHSAYSLLEGALKIRQIIQHAISDHAPAIAITDTNNLF
GALEFSQYCFTDGIQPIIGCQLAIDFDHENYDPRLTKPRTPSDFASIVLFAASEAGYTHL
IRLVSHAYLDKSDTDLPHIRADWLLSQNEGIIALTGGWSGPINLALTENKKERAIEHLTY
LKEIFGDRLYVELQRHNSYNRKVEAALVELAYAHEIPLVATNEAFFLNKEGYEAHDALMA
VAEGQIVSNPNRRRVTPDHYLKSQDEMVSLFSDLPEALENSVEIALRCHAFVPTRKPILP
RFTERSVDPDSALEDEAKELLNQAKAGLKMRLETIGLAEGYTVEDYEQRLDYEISVITRM
RFPGYFLIVSDFIKWAKGNDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RISMPDFDIDFCQDRREEVIQYVQEKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VDYLSKLVPAMPGSNVELAVAIRDEPKFKEEKKKNPVIGRMLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKCVEQAGLVKFDFLGLKTLTVLKMATDFVA
RKDVKIDLSNISLNDETTYTMLARGETVGVFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPTYNARKHGKEEIASIHPKIDHLVKETQGVIVYQEQVMQIAQVLSGYSLGEA
DLLRRAMGKKIHKEMQKQRTRFVSGAVDGGIDKNQAEVIFDLLAKFADYGFNKSHAAAYA
IVSYQTAYMKAHYPVEFLAASMTCDMTNTDKLNDFRREALRLGIKVIAPCVQTSCRVFEI
GEKCIYYSLAAIKGIGDLVVDHIVACRGDKPFKDLEDFCERIDPRIVNKRAMESLIYAGA
LDCFQVAREVLLASLGTLNARAIRILDNNSSGQTDIFGMIGGPKEPLILSQASPWSLAEK
LHYEFQVIGFYFSAHPLDEYQAILMKKRVQIWSDFSDAVKKGATAARLAGTVVAKQIRKT
KSGKKMGVIQFSDTSGHYEAVIFSEGLSIYEDMLEPGKSFIVTVIAEDRSEGIGLRIETI
QSLEKESIRDRKTMRLFVKSVDILPQVEQHLKSGGNGEVAFILIQENGLREVEVMLSKRY
KVNLQVANAIKAIHGVINVELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaaaaaaggaaaaatactaaacagtaaaaattctcttcctcgctttattcat
ttgagggtgcattcagcttattcacttcttgaaggagctttgaaaatcaggcaaattatt
caacatgcaatttctgatcatgcaccggcaatagctattacagatacgaataatttgttt
ggcgctttagagttctctcagtattgttttacagatggtattcaacctattattggttgt
cagcttgcgattgattttgaccatgagaattatgatccacgtttaactaaaccacgtacc
ccttctgattttgcttctatcgtgttatttgctgctagcgaagcaggctatactcatttg
attcgccttgttagtcacgcttaccttgataagagtgatacggatcttcctcatattagg
gctgattggctattatcacaaaatgaaggaattattgctttaactggggggtggagtggc
cccattaatttggctttaacagaaaataaaaaagaacgagctattgagcatttaacttat
ttgaaagaaatttttggtgatcgtctttatgttgaattacaacgacataattcttacaat
cgaaaagttgaagctgcgcttgttgaattagcttatgcgcatgaaattcctcttgttgca
actaatgaggctttttttctaaataaagaagggtacgaagctcatgatgcattgatggcg
gtggcagaagggcagatcgtctctaatccaaatcgcagacgtgtgacgccagatcattat
ttgaaatcacaagatgaaatggtttcattattttctgatcttccagaagctttagaaaat
agcgttgagattgcattacgttgtcatgcttttgtaccaactcgaaaacctattttacct
cgttttacagagcgatccgtggatccagattctgctttagaggacgaagctaaggagttg
ttaaatcaggctaaagctggtttaaaaatgcgtcttgaaacaattggtttggctgaaggt
tatacagttgaagattatgagcaacgactggattatgaaatttcagttatcacacgtatg
cgatttcctggttattttcttattgtttcggattttataaaatgggcaaaaggcaatgat
atccctgtcggtccagggcgtggctctggcgccggttcacttgttgcctatgccttaact
atcactgatgttgatcccttgcgtttttctctcttgtttgagcgttttctcaatccagat
cgtatttctatgccggattttgatatcgatttttgtcaggatcggcgggaagaggttatt
caatacgttcaggaaaaatatggacgtgatcaagtggctcaaattattacatttggtaaa
ttacaggcacgtgcggtattacgtgatgttggacgtgttttggaagtgccatatcgtcag
gttgattaccttagcaaattagttcctgctatgcctggcagtaatgttgagttggcagtg
gctattcgagatgaacctaaatttaaagaagaaaagaaaaagaatcctgtcattggacgc
atgttggatatagcacttcagcttgaggggctttaccgccatgcatcaactcatgcagca
ggaattgttattggtgatcgaccgttgtcagagctcgtaccaatgtatcgcgatccacgt
tctgatatgccagttacccaatttaacatgaaatgtgttgagcaagctggtttggtaaag
tttgattttcttggtttaaaaacgctcactgttttaaaaatggccacggattttgttgca
cgaaaagatgtaaagatagatttgtcgaatatctctcttaatgatgaaacgacttatact
atgttagcacgtggtgagacagttggtgtatttcaagttgaaagttctggtatgcgtaag
gcacttatcgggatgaagccagaccgcattgaagatattattgcgcttgtagcgctttat
cgtcctggtccaatggagaatattccaacatataatgcacgcaaacatgggaaagaggaa
attgcttctattcaccctaaaatagatcatctggttaaagagacacaaggcgttattgtt
tatcaagaacaagttatgcagattgcacaggtactttctggttattctcttggagaagcg
gatttattgcgccgagctatgggtaaaaagatccacaaggaaatgcaaaaacagcggaca
cgttttgtaagtggcgctgttgatggtggtattgataaaaatcaagctgaagttattttc
gatcttttagcaaaatttgcggactatggttttaataaatcacatgctgccgcttatgcc
attgtttcatatcagacagcatatatgaaagcacattatccagttgaatttttagctgct
tccatgacatgtgatatgacaaatacggataagttgaatgattttcgacgcgaagcgtta
aggctaggaattaaagttattgcaccttgtgtgcaaacatcgtgtcgtgtttttgaaata
ggtgaaaagtgtatttattattcccttgcggctattaaaggtattggagatttagtagtt
gatcatattgtcgcttgtcggggagataagccttttaaagatctggaagatttttgtgag
cgtattgatcctcgtattgttaataaacgtgcgatggaaagtttgatttatgcaggtgct
cttgattgttttcaggttgcacgtgaggttttactggcaagtcttggaactcttaatgca
cgtgctattcgtattcttgataataattctagtgggcagactgatatatttggaatgata
ggtgggccgaaagagcctttgattttatcgcaagcatctccatggtctttggctgaaaaa
cttcattatgaatttcaagtaataggtttttatttttctgctcatcctttggatgagtat
caggctattcttatgaaaaaacgcgttcaaatttggagtgatttttctgatgcagttaaa
aaaggagcaactgctgctcgacttgctggaactgttgtggcaaaacaaattcgcaaaaca
aaatctggtaaaaagatgggggttattcagttttctgatacaagtgggcactatgaggca
gttatattttctgaggggctttctatttacgaggatatgttagaaccgggaaagtctttt
attgttacagtgattgcagaagatcgctctgaaggaattggtttacgtattgaaactatt
cagtccttagaaaaagaatcaatacgggatcgtaaaacaatgcgcctttttgtaaaatca
gtagacattcttccacaagttgagcagcatttaaaatctggtggcaatggggaagtggca
tttattttgattcaagaaaatgggttacgagaagttgaagttatgctttcaaaacgatat
aaagtaaatttgcaagtggcgaatgctataaaagcaattcatggtgtgatcaacgtagag
ttgagttag
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