Bartonella sp. WD16.2: BWD162_009390
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Entry
BWD162_009390 CDS
T05203
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
barw
Bartonella sp. WD16.2
Pathway
barw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
barw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BWD162_009390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barw03021
]
BWD162_009390
Transcription machinery [BR:
barw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BWD162_009390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Med21
DUF713
DUF4351
CC2-LZ
Tachylectin
ATG16
Motif
Other DBs
NCBI-ProteinID:
AQX20048
LinkDB
All DBs
Position
complement(1044068..1046071)
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AA seq
667 aa
AA seq
DB search
MATKAKQKDSVAETGQVSLDSPLLDFSDDAIKKMIKLAKKNGYVTMDELNAVLPSESVTS
EQIEDTLAMLSEMGINVVDDEDEVDSEPYEEEITIEGGDLVEATSRSIATISKCDTTDRT
DDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELNEK
RILLREIIDLEMTYAGPEAKQAPAIERSGMERIKEEMPCSNMHDVDDLAADIGVEDEEED
EVSLSLAAMENELCPQVMETLDFIAETYVKLRKLQDQHVESSLADCKEDALSASQKKKCT
QLKADLVQAVKSLSLNQNRIEALVEQLYDINKRLVHSEGKLKRLANNYGVGHEDFLKEYQ
GRELDADWINYIATLPGSGWKEFSTREAKVIQSLRSEIQSLAQETAISIGEFRRIVTQVQ
KGEREATIAKKEMVEANLRLVISIAKRYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSSK
LSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDTTTR
VLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRK
LRSFLDS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggctaaacaaaaagatagcgtggcagaaacgggccaagtaagtttggac
agtcctcttcttgatttttccgatgatgctatcaaaaagatgattaaactcgccaagaaa
aatggttatgtgacaatggatgagttgaatgcagttcttccttctgaatcagttacatct
gagcaaattgaagatacattggccatgctttctgaaatggggattaatgttgtagatgat
gaagatgaagtcgattctgaaccttatgaggaagaaattacaatagaaggtggtgattta
gtggaagccaccagccgatcaattgcaacaatatcgaaatgtgatacgacagatcggact
gatgatccggtgcgcatgtatttgcgtgaaatgggagcagttgaattactttcacgtgaa
ggtgaaattgctattgctaagcgtattgaagcagggcgtgaaacaatgattgcagggtta
tgtgagagccctttaacatttcaagccttaattatatggcgtgaagaattaaatgagaag
cgtatccttcttcgtgaaattattgatcttgaaatgacttatgctggtccagaagccaaa
caggctcctgctattgaacgcagtggaatggaaagaataaaagaggaaatgccgtgttct
aatatgcatgatgtagatgatcttgcagcagatattggtgttgaagatgaagaggaggat
gaagttagcttatcgcttgcagcgatggaaaatgaactgtgtcctcaggttatggaaact
ttagattttattgctgagacgtatgtaaaactgcgaaaattgcaagatcaacacgttgaa
agcagtttagcagattgtaaagaggatgctctttccgcttctcaaaaaaagaaatgcact
caattgaaagctgatttagttcaagcagtaaaatctctttctttgaaccaaaatcgtatt
gaggcgttggttgaacagctttatgatatcaataaacggttggttcatagtgaaggtaaa
ttgaagcggcttgctaacaactatggagttggacacgaagattttttaaaagaatatcaa
ggccgtgaattagatgcagattggattaattatattgcgactttgccggggtctggctgg
aaagaattttcaactcgtgaagccaaggtaatacaaagtttgcgcagtgaaatacaaagc
cttgcgcaagaaactgctatttcaattggggagtttcgtcgaattgttacgcaagtacaa
aaaggtgagcgtgaagcgacaattgctaaaaaggaaatggtggaagccaatttacgtctt
gtgatttcaattgcaaaaagatacactaatcgtggtttacagtttcttgatcttattcaa
gaaggcaatatcggcttgatgaaggcggtcgataaatttgaataccggcgtggatacaaa
ttttcaacttatgcaacatggtggattcgtcaggcaattacgcgttcgatagctgatcaa
gcgcgcaccattcgtattcctgttcatatgattgaaactattaataagattgttcgtaca
tcacgtcagattttacatgaaattgggcgtgagcctacaccggaagaattgtctagcaag
ctttctatgccattagaaaaagtgagaaaagtgcttaaaattgcaaaagagcctatttca
cttgaaacaccagttggtgatgaggatgattctcatttaggtgatttcattgaagataga
aacgcgttattgccgattgatgcagccattcaagctaatttacgagatacaacaactcgc
gtacttgcttcactaacgccgcgtgaagaacgtgttttgcggatgcgttttggtattggg
atgaacactgatcacacgttggaagaagttggtcagcagttttcagttacacgtgagcgt
atccgccagattgaagccaaagcgcttcgtaaattaaagcatcctagccgttcacggaaa
ttacgcagttttcttgattcttaa
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