Buchnera aphidicola Sg (Schizaphis graminum): BUsg_256
Help
Entry
BUsg_256 CDS
T00087
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bas
Buchnera aphidicola Sg (Schizaphis graminum)
Brite
KEGG Orthology (KO) [BR:
bas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bas03016
]
BUsg_256 (rnb)
Enzymes [BR:
bas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BUsg_256 (rnb)
Transfer RNA biogenesis [BR:
bas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BUsg_256 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AAM67814
UniProt:
Q8K9Q5
LinkDB
All DBs
Position
292269..294209
Genome browser
AA seq
646 aa
AA seq
DB search
MFQNNPLLAQLKKNLHAKTPRVEGIVKSTERGFGFLEVDAQKSYFIPPKNMKNVMHGDKI
SAVLKIEKDREIAEPEKLIEPFLNRFVGKIEKKDNKLFIFPDYPFLKDFIACRPKKSCVH
VFQTGDWAVAKLIQHKLNGNHIFYAELIEEIVKANNPLIPWWVTLSRHNLERKEPKIEKD
DLILKNNSHREDLTHLNFITIDNFNTKDIDDALFIEEIHNGNLRLIVAIADPTSYIKSGS
KLDITAAKRGFTNYLPGFNVPMLPRSLSEDICSLNPHERRPVLACCITILKDGNICSKIN
FFLAWIKSKSKLSYDNVSDWIEKKSSWKPETKSIENQILLLHRLCLLRIKWRTSNAVLFQ
DSLEYRFQFSETGIVEDVVIEKRRIAHKIIEESMIIANISAANFLSKNLGFGIYNTHAGF
DPINAENVVSFLNNYNLKFTVKEITTLKGFCNLRRVLNILSDNYINSRIRRYQSFGDFSI
TPSPHFALGLVEYATWTSPIRKYSDMINHRLLKSIINQDTNITKPSEDIKLKISEQKRRN
RIAERDISDWLYTLLLQKKEFKNKKFNAEIIDVSRSGIRAKLLENGANVFIPALFLHPIR
EELVFNQETGKVFIKGVLYYKISDLITVVLSEIRLQTRSIIARIDH
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaacaatccattacttgcacaattaaaaaaaaatctacatgctaaaacacca
cgggttgagggaatagtaaaaagcactgaaagaggatttggatttttagaagttgatgct
caaaaaagttattttatacctcctaaaaatatgaaaaatgttatgcatggagataaaata
tcagctgtattaaaaatagaaaaagatcgtgaaatagctgaacctgaaaaattgattgaa
ccttttttaaatcgatttgtaggaaaaatcgaaaagaaagataacaaactatttattttt
cctgattatccatttttaaaagattttatagcatgtcgacctaaaaaaagttgtgtccat
gtttttcagacaggagactgggctgtagcaaaattaattcaacacaaacttaatggaaac
catatattttatgctgaattaattgaagaaatagttaaagcaaataatccattaatacca
tggtgggtaactttatcacgtcataatcttgaaagaaaagaacctaaaatagaaaaagat
gatcttattttaaaaaataattctcatagagaagatttaacacatcttaattttattaca
atagataattttaatacaaaagatattgacgacgctctttttattgaagaaattcataat
ggtaatcttcgtttaatcgtagctattgcagatcctacgtcttatataaagagtggtagt
aaattagatataactgctgcgaaaagaggatttacaaattatttaccaggttttaatgtt
cctatgttacctcgaagtttatcagaagatatatgttctttaaatcctcatgaacgtcgt
ccggtattagcatgttgtatcacaattttaaaagatggaaacatttgtagtaaaattaat
ttttttttagcatggattaaatcaaaatcaaaattatcttatgataatgtatcagattgg
attgaaaaaaaaagttcatggaaaccagaaacaaaatcaattgaaaatcaaatattactt
ttacatcgtttgtgcttattacgtataaaatggagaacgtcaaacgctgtactatttcaa
gatagtttagaatatagatttcaattttctgaaactggaattgtagaagatgttgttata
gaaaaaagacgcattgcacataaaattattgaagaatcaatgataatagcaaacatatct
gctgccaactttctatcaaaaaatcttggatttggaatatataatacacatgctggtttt
gatcctattaatgctgaaaatgttgtttcctttttaaacaattataatttaaaattcact
gtaaaagaaattactactttgaagggattttgcaatcttaggcgtgtcttaaatatatta
tctgataattatattaatagtcgtattcgtcgttatcagtctttcggagattttagcatt
actccgagtcctcatttcgctttaggtcttgtagaatatgctacttggacctctcctatt
cgaaaatacagtgatatgatcaatcaccgtttgttaaaatctattatcaatcaagataca
aatattactaaacctagtgaagatataaaactaaaaattagtgaacagaaacgtcgcaat
agaattgcagaacgagatatttcagattggctttataccttacttttacaaaaaaaagaa
tttaagaataaaaaatttaatgctgaaattatagatgtttcaagaagtggaataagagct
aaattattagaaaatggtgcaaatgtattcattcctgctttatttttacatcctattcga
gaagaactagtttttaatcaagaaacaggaaaagtctttattaaaggtgttttatattac
aagatatctgatttaataacagttgttttgtcagaaattcgattgcaaacacgtagtatt
attgctcgaattgatcattaa
DBGET
integrated database retrieval system
