Buchnera aphidicola Sg (Schizaphis graminum): BUsg_480
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Entry
BUsg_480 CDS
T00087
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bas
Buchnera aphidicola Sg (Schizaphis graminum)
Pathway
bas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BUsg_480 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bas03021
]
BUsg_480 (rpoA)
03400 DNA repair and recombination proteins [BR:
bas03400
]
BUsg_480 (rpoA)
Enzymes [BR:
bas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BUsg_480 (rpoA)
Transcription machinery [BR:
bas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BUsg_480 (rpoA)
DNA repair and recombination proteins [BR:
bas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BUsg_480 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AAM68023
UniProt:
O69232
LinkDB
All DBs
Position
complement(547868..548857)
Genome browser
AA seq
329 aa
AA seq
DB search
MQNSIIGFLKPRLVEIEQITATHTKVTLEPLERGFGHTLGNALRRILLSSMPGYAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKELAVKVHGKDEVFMSLNKSGIGSVTASDIIHDGD
VEIIKPDHLICHLTDENASIQMRIKVQRGRGYIPASSRIHMEDDLRPIGCLLVDACYSPI
NRISYNVEAARVEQRTDLDKLIIEMKTNGTIDPEEAIRRAATILSEQLEAFVDLRDVKEP
EIKEEKPEFEPILLRPVDDLELTVRSANCLKAESIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDILAARNLSLGMKLEKWPPSSILEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctattattggttttttaaaaccacgtttagttgaaattgaacaaattact
gcaactcatactaaagtcactttagaaccattagaaagaggttttggtcatacattaggt
aatgcccttcgtagaattcttctttcttctatgccaggatatgctgtaactgaagttgaa
attgatggagtgttacacgaatatagcactaaagaaggtgtacaagaagatattttagaa
attttattaaatttaaaagaattagcagtaaaagtacatggaaaagatgaagtttttatg
tcattaaataaatcagggattggttctgtcactgcgtctgatataattcacgatggtgat
gtagaaattattaaaccagatcatttaatttgccatttgactgatgaaaatgcctctatt
caaatgagaattaaagtacaacgtggaagaggctatatccccgcttcttctagaatccat
atggaagatgacttgagaccaataggttgtttgttagtagatgcatgctatagtccaatc
aatcgtatttcttataatgtagaagctgcacgtgtagaacaaagaacagatttagataaa
ttaattatcgaaatgaaaacaaatggaacaatagacccagaagaagctattcgacgtgct
gctactatcttatctgaacaattagaagcatttgttgatttaagagatgtgaaagaacct
gaaataaaagaagaaaaacctgaatttgagcctattttattacgtcctgtagatgattta
gaattaactgttcgttctgcaaattgtcttaaagctgaatcaatacattatattggtgat
ttagttcaaagaacagaagttgaacttttaaaaactcctaatttaggtaaaaaatcttta
actgaaattaaggatatattagcagctcgaaatttatctcttggaatgaaattagaaaaa
tggcctccatcgagtattttagaagaataa
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