Buchnera aphidicola Sg (Schizaphis graminum): BUsg_572
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Entry
BUsg_572 CDS
T00087
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bas
Buchnera aphidicola Sg (Schizaphis graminum)
Pathway
bas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUsg_572 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bas03021
]
BUsg_572 (rho)
03019 Messenger RNA biogenesis [BR:
bas03019
]
BUsg_572 (rho)
Transcription machinery [BR:
bas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BUsg_572 (rho)
Messenger RNA biogenesis [BR:
bas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BUsg_572 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AAM68106
UniProt:
O51891
LinkDB
All DBs
Position
complement(626807..628066)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNMPVSELITLGEKMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNAVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMSEIDAMEFLLNKLSMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgcacttaaaaatatgccagtttctgaattaattactcttggtgaaaaa
atggggttggaaaatttagcgcgtatgcgtaaacaagatattatttttgccatccttaaa
caacatgcaaaaagtggagaagatatatttggagatggtgttttagaaatattacaagat
ggatttggttttttacgttccgctgatagttcttatttagctggtcctgatgatatatat
gtttcaccaagtcaaattcgtagatttaatttacgtactggtgatactatttctggaaaa
ataagaccaccaaaagaaggtgaaagatatttcgctctacttaaagttaatgcagtaaat
tacgataagcctgaaaatgctagaagcaaaattctatttgaaaatttaacacccttacac
gccaattccagattaagaatggaaagaggaaatggttcaacagaagacctaacagcaaga
gttctagatttagcttcacctattggacgaggtcaaagaggtttaattgtagcaccgcca
aaagcaggaaaaacaattttattacaaaatattgcacagagcatagcttacaatcatcca
gattgcgtactgatggttttattaattgatgaaagaccggaagaagtaactgaaatgcaa
agattagtgaaaggagaagtagttgcatctactttcgatgaacctgcatcaagacatgtt
caagtggctgaaatggttattgaaaaagcaaaaagactagtagaacataaaaaagacgta
attatattacttgattcaattacccgcttagcacgtgcttataataccgttgttccggca
tcaggaaaggttttaacagggggggtagatgctaacgctttacatcgacctaaaagattt
tttggtgctgctcgcaatgtagaagaaggaggcagtttaacaattattgctacagcatta
gttgatacaggatcgaaaatggatgaagtgatttacgaagaatttaaaggaacaggaaac
atggaacttccattatctaggaaaatagcagaaaaacgtgtttttcctgctattgattat
aatagatctggtactagaaaagaagaactattaactttaccagatgagttacaaaaaatg
tggattttaagaaaaattattcatcctatgagtgaaatagatgcaatggaatttttgtta
aataaattatctatgacaaaaacaaacgatgaattttttgatatgatgaaaagatcataa
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