| Entry |
|
|---|
| Symbol |
rpoB
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
|
|---|
| KO |
|
|---|
| Organism |
basb Bacillus sp. SB49
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:basb00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M662_00880 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:basb03021]
M662_00880 (rpoB)
03400 DNA repair and recombination proteins [BR:basb03400]
M662_00880 (rpoB)
Enzymes [BR:basb01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M662_00880 (rpoB)
Transcription machinery [BR:basb03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M662_00880 (rpoB)
DNA repair and recombination proteins [BR:basb03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M662_00880 (rpoB)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
162931..166458
|
|---|
| AA seq |
1175 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYEWFMEEGLKEMFQDISPIEDFTG
NLSLEFVDYSLGEPKYPVDESKDRDVTYNAPLRVKVRLLNNETGEVKEQEVFMGDFPLMT
DTGTFVINGAERVIVSQLVRSPSVYFNKKIDKNGKRGYTATVIPNRGAWLEFETDAKDVV
HVRIDRTRKLPITVLLRALGFGTDQEIIDLIGDNEYLKNTLEKDNTETTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLARVGRYKMNKKLHIKDRLFNQTLAETLVDEETG
EVIAEKGDKIDRRLLNKLIPLFDDAEGTLSEETLEPVDGVLEDPIQVQSVKIVDPTDPEG
ERSINVIGNANIDRDVKNITPADILSSISYFFNLLHDVGGTDDIDHLGNRRLRSVGELLQ
NQFRIGLSRMERVVRERMSIQDTSSITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPL
AELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKV
NEFGFIETPYRRVDPDTNKVTDQIDYLTADEEDNYVVAQANAKLGDDGSFMDEEVISRFR
GENTVVSRDRIDYMDVSPKQVVSAATACIPFLENDDSNRSLMGANMQRQAVPLLKPDAPL
VGTGMEYVSGKDSGAAVICRHEGIVERVEAKEVRVRRISEVDGKEVEGDVDRYRLQKFIR
SNQGSCYNQRPIVAKGDRVTKGEILADGPSMDMGELALGQNPLVAFMTWDGYNYEDAIIM
SERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKDLDDRGIIRVGAEVS
DGDLLVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNRED
GDELPPGVNQLIRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPFLPDGTPVDIML
NPLGVPSRMNIGQVLELHLGMAARLMGQRVATPVFDGAREEDVWETLQEAGMARDAKTIL
YDGRTGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQS
LGMDVKILNGDEQEIEMRDIEEEETKQSENLNLDD |
|---|
| NT seq |
3528 nt +upstreamnt +downstreamnt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagttatgcacgtatt
agtgaagtattggaattgcctaacttgattgagattcaaacggcttcctatgagtggttc
atggaagaaggtttgaaagagatgttccaggacatttcgccaattgaagatttcaccggt
aatctttcacttgaattcgtagactacagccttggcgaaccaaagtatccagtcgatgag
tcaaaggatcgcgacgtaacatataacgcaccgcttcgtgtgaaagtacgtcttctaaat
aatgagacgggtgaagtgaaagagcaggaagtattcatgggtgatttcccattgatgaca
gacacaggtacctttgtaatcaacggtgcggaacgtgtcatcgtatcccagcttgttcgt
tctccgagtgtatatttcaataagaagattgataagaacggtaagcgtggttataccgct
acggtcattcctaaccgtggagcatggttagagtttgaaacagatgccaaagacgtcgta
cacgtccgcatcgaccgtacgcgtaagcttcctatcacagtgctccttcgtgctctagga
ttcggtaccgatcaagagatcatcgatttgatcggagataatgagtacctgaagaacacg
cttgaaaaagacaatacggaaacgacagagaaagctttgcttgagatatacgagcgtcta
cgtcccggcgagccgccgaccgtagaaaatgctaaaagtctccttgtctctcgtttcttt
gatccgaaacgctatgatttagctagagtcggaagatataaaatgaacaagaagcttcat
ataaaggatcgtttgtttaaccaaacccttgctgaaacattagtggatgaggaaacaggg
gaagttattgcggagaagggtgacaagattgaccgccgtcttcttaacaaactgattcca
ttgtttgatgatgcagaaggtacattgagcgaggaaactcttgagcctgtagacggcgtt
cttgaggacccgattcaagtccaatctgtaaaaattgtagacccgacggatccggaaggg
gaacgttctatcaacgttatcggtaatgcgaacatcgaccgcgacgttaagaacatcact
ccggctgacatcttgtcttctatcagttatttctttaacctgcttcatgatgttggtggc
acggacgatattgaccaccttggtaaccgtcgtctgcgttctgtaggagaacttcttcag
aaccagttccgaatcgggctttcccgtatggagcgtgtggtacgtgagcgtatgtccatt
caggatacatcatccatcacaccacaacagctgatcaatatccgtccggttattgcatcc
attaaagagttcttcggaagctcccaactatcccagtttatggaccaaaccaacccgtta
gcagaattgactcacaaacgtcgtctatctgcgcttggaccgggtggtttaacacgtgaa
cgtgcaggattcgaagttcgtgacgtacactactcccactatggccgtatgtgtccgatc
gaaactcccgagggaccgaacatcggtttgatcaactccttgtcttcctatgcgaaggta
aacgaattcggctttattgaaacaccatatcgccgtgtggatccggatacgaacaaagta
accgaccaaattgattaccttactgctgatgaagaagataactacgtcgtagcacaagct
aacgcgaagcttggtgatgacggaagtttcatggacgaagaagttatttcccgtttccgt
ggggagaacacggtcgtaagccgtgatcgtattgattacatggatgtatcacctaagcag
gttgtatctgcagcgacggcttgtattcctttcttggaaaacgatgactccaaccgttcc
ttgatgggtgcgaacatgcaacgtcaagcagtaccattgcttaaaccggatgcaccttta
gtcggaacaggtatggaatatgtatccggtaaagactccggtgccgctgtcatctgtaga
cacgaaggaattgttgagcgtgtcgaagcgaaagaagttcgcgtacgccgcatttctgaa
gtggacggcaaagaagtagaaggcgacgtggatcgttaccgtctgcagaagttcatccgt
tccaaccaaggaagctgttacaaccagcgtccgattgtcgctaaaggtgaccgtgttaca
aaaggagaaatccttgctgatggtccttccatggatatgggtgagctggcgcttggacag
aacccgctggttgcattcatgacatgggatggttacaactatgaggatgccatcatcatg
agtgagcgacttgttaaagatgacgtctatacgtcgatccatattgaagaatatgaatcg
gaagctcgtgatacgaaacttggaccggaagaaatcactcgtgatattccgaacgtcggg
gaagatgcacttaaagatcttgatgatcgcggcatcattcgtgtcggagcagaagtaagt
gacggagatcttcttgttggtaaagttacgcctaaaggtgtaacggaattgtcggcagaa
gaacgtttgcttcacgcaatcttcggagagaaagcccgtgaagtccgggatacatccttg
cgtgtaccgcacggagccggcggaatcgttcttgatgttaagatcttcaatcgcgaagat
ggagacgagctgccaccaggggtcaaccagttgattcgtgtttatatcgttcagaaacgt
aagatttctgaaggggataaaatggccggccgtcacggtaacaaaggtgttatttccaag
attcttccagaagaagacatgcctttcctaccggatggtactcctgtagacatcatgttg
aacccgcttggtgtaccgtcacgtatgaacatcggacaagtgttggaacttcacttaggt
atggcggcccgtttgatgggtcagagagtggcaacaccagtattcgatggtgctcgtgag
gaagacgtttgggaaacattgcaggaagctggcatggcacgtgatgcgaaaacgatcctt
tacgacggacgtacaggtgagcctttcgataaccgtgtttctgtcggtgtcatgtacatg
atcaaactggcgcacatggtcgacgacaagcttcacgctcgttctaccggaccttattca
cttgttacgcagcagccgcttggtggtaaagcacaattcggtggacagcgtttcggtgag
atggaggtttgggcactggaagcatacggtgccgcatatacacttcaagaaatcttgacg
gtcaaatccgatgacgtcgttggacgtgtgaaaacatacgaagctatcgtcaaaggtgac
aatgttccagaaccaggcgtacctgagtccttcaaagttcttattaaagagcttcaaagt
ctcggtatggacgtgaagattctaaatggtgatgagcaggaaatcgaaatgcgcgatatt
gaagaagaagaaaccaaacaatccgagaatttgaacttagacgattaa |
|---|
