Bacillus sp. SB49: M662_00885
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Entry
M662_00885 CDS
T10339
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
basb Bacillus sp. SB49
Pathway
basb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
basb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M662_00885 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
basb03021
]
M662_00885 (rpoC)
03400 DNA repair and recombination proteins [BR:
basb03400
]
M662_00885 (rpoC)
Enzymes [BR:
basb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M662_00885 (rpoC)
Transcription machinery [BR:
basb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M662_00885 (rpoC)
DNA repair and recombination proteins [BR:
basb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M662_00885 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QHT45159
LinkDB
All DBs
Position
166530..170141
Genome browser
AA seq
1203 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHLELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFAAYIVTEPGETSLERKQLLSEKEYRTYREKFGQGFQAAMGAEAIRKLLY
DIDLDGEVEVLKEELKTAQGQRRTRAIKRLEVLESFRHSGNDPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPTIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKE
MALELFKPFVMKELVSRGLAHNIKSAKRKIERVHHEVWDVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLSLEREGAIGEGMVVKDLNEALMAYQNGYAHLHTRVAVQ
ASSLNNETFTEKQNGQLLLTSVGKLIFNEMLPASFPYMNEPTKENLEIKTPDHYFVDKGT
NIREEIAKREEVAPFKKGILGDIIAEVFKRFSISETSKMLDRMKDLGFAYSTKAGITVGV
SDVVVLPEKQEILDEAQEKVDKVLKQFRRGLITEEERYDRVIDIWSAAKDDIQGRLMQSL
DPRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLPVTALKEGTEIIEPLI
DRLIGRTSFQKVKHPETGAVLVGRNEVISEDAARQIVEAGVERVVIRTAFTCNTKHGVCK
KCYGRNLATGDEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIV
EARNPKGQAVITEIDGTVHEVNEVKEKQEIVIQGSVESRSYTAPYGARMRVAVGDEVKSG
EALTEGSIDPKELLTVKGLDGVQEYLLKEVQKVYRMQGVEISDKHVEVMVRQMLRKVRVL
DSGDTDVLPGSLLEIHQFKEANQKVLLEGGQPAVGRPVILGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRKIQAQSEAQKQGASEPTEEV
THS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaacaactttgagtatatgaaaatcggcctcgcttcaccggataagatt
cgttcttggtcttatggagaagtgaagaagccggaaaccatcaactatcgtacgttgaaa
cccgagaaagacggtcttttctgtgagcgtatcttcggcccacaaaaagactgggaatgt
cactgtgggaaatacaagcgcgtccgctataaaggcgtcgtttgtgaccgctgtggagta
gaagtaacgaaagcaaaagtacgtcgtgagcgtatggggcacttggaattagctgcccct
gtctctcacatctggtacttcaaaggaatccctagccggatgggtcttgtcctggacatg
tccccaagagcgctggaagaagttatttacttcgcagcctatatcgttacagaaccgggc
gaaacatctcttgagagaaagcagctgctttctgagaaagagtatcgtacgtaccgtgag
aagttcggtcaaggtttccaggccgctatgggtgcagaagccatccgtaaattactttat
gatatagatcttgacggtgaagttgaagtgttgaaagaagagctcaaaacagctcaggga
caacgccgcacacgtgcgatcaagcgccttgaagtgcttgagtctttccgtcactcagga
aacgatccatcttggatgatccttgacgtgcttccggtcattccaccggaacttcgtccg
atggttcaactggatggtggtcgtttcgcgacatctgatttgaacgacctttatcgtcgt
gttatcaaccgtaacaaccgtttgaaacgtctgcttgaccttggagcacctacgattatc
gttcaaaacgagaaacgtatgcttcaagaagctgtcgatgctttgattgataacggccgt
cgcggccgtccggtaacaggaccgggtaaccgtccgcttaaatccctttctcacatgctg
aaaggtaagcagggtcgtttccgtcaaaaccttcttggtaaacgtgttgactactctggt
cgttctgtaatcgtcgtaggtccatctttgaaaatgtatcaatgtggacttccgaaagaa
atggcgcttgagctgttcaagccattcgtaatgaaagaattggtgtcccgcggattagca
cataacatcaaatctgcgaaacgtaagatcgaacgcgttcaccatgaagtatgggacgtc
ctcgaagacgtcatcaaagagcacccggttctgcttaaccgtgcaccaacgttgcaccgc
ctcggaatccaggcctttgaaccaacgcttgtagaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcatataatgccgacttcgatggtgaccaaatggcggttcacgtacca
ttgtcttctgaagcacaggcggaagcacgtatcttgatgcttgctgcacagaacatcctt
aaccctaaggatggaaaaccggttgtaactccttcacaggatatggtacttggtaactac
tatctatctcttgagcgtgaaggcgcaattggagaaggtatggtagtgaaagacttgaac
gaagcgttgatggcttaccagaatggatatgctcatctgcacacacgtgtagccgttcaa
gcgagctccttgaacaatgaaacatttacagaaaaacaaaacggtcagcttcttcttact
tccgttggtaaattgattttcaacgaaatgcttccggcttcgttcccatacatgaacgag
cctacgaaagagaacttggaaatcaagacaccagatcactacttcgtggataaaggaacg
aatatccgtgaagagatcgctaagcgtgaagaagtagcgccgttcaagaaaggcatcctt
ggagatatcatcgcagaagtattcaaacgcttctccatcagtgaaacgtccaagatgctt
gatagaatgaaggatctcggtttcgcttattctacgaaagcgggtatcactgtcggtgta
tccgacgtcgtcgtacttcctgagaaacaagaaattcttgatgaagctcaggagaaagtc
gacaaagtcttgaaacagttccgtcgtggtctaattacggaagaggaacgctatgatcgt
gtcatcgacatatggtcagcagcgaaagatgatattcagggccgcttgatgcagtcactg
gatccgcgtaacccgatcttcatgatgagtgattccggagcacgtggtaacgcatctaac
tttacgcagcttgcgggtatgcgtggtcttatggccaacccggctggtcgtatcattgaa
cttccaatcaagtccagcttccgcgaaggtctgactgtacttgaatacttcatctctact
cacggtgcacgtaaaggtcttgccgatacagcccttaagactgccgattcaggttacctg
actcgtcgtcttgttgatgtagcgcaggacgtcatcgttcgtgaagatgactgtggtaca
gacagaggtcttcctgttacagctcttaaagagggtacagaaattattgaacccctcatc
gaccgtttgatcggacgtacttccttccagaaagtgaagcacccggaaacaggcgctgtc
cttgtgggtcgtaatgaagtaatctctgaagatgctgctcgtcaaattgtcgaagcaggc
gttgaaagagtggttatccgtacagcgttcacgtgtaacacgaaacacggagtgtgtaag
aagtgttacggacgtaacctggcaacaggggatgaagtcgaagtgggtgaagcagttgga
atcatcgcagcgcagtccattggtgaaccaggtactcagcttacaatgcgtaccttccac
acaggtggggtagccggagatgatattacgcagggtcttccacgtatccaggagatcgtt
gaagcgcgtaaccctaaaggtcaagctgtcatcacggaaatcgacggaaccgtccacgaa
gtgaatgaagtgaaagagaagcaggaaatcgtcatccaaggttctgttgaatcacggtct
tacacagcaccatacggcgctcgtatgagagttgctgtcggtgatgaagtgaagtccggg
gaggcacttacagaaggttccatcgatccgaaagagcttcttacagtcaaagggcttgac
ggtgtacaggaataccttcttaaggaagtacagaaagtttaccgtatgcaaggggtagaa
atttctgataagcacgtggaagtaatggtacgccagatgcttcgtaaagtgcgtgttctt
gattctggagatacagatgtattgccgggatcccttcttgagatacaccagttcaaagaa
gccaaccaaaaagtgcttctcgaaggcggacagccggctgttggtcgtccggtcatcctt
ggtattacaaaagcatcccttgaaacagacagcttcttgtctgccgcatccttccaggag
acaactcgtgtcttgactgatgcagcaatcaaaggtaagcgtgatgagcttcttggactg
aaggagaacgtaatcatcggtaaacttgtcccggcaggtacgggtatgacaagataccgt
aagattcaagctcaatccgaggctcagaagcagggtgcttccgaaccaacagaagaagta
acacactcttaa
DBGET
integrated database retrieval system
