Bacillus sp. SB49: M662_02140
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Entry
M662_02140 CDS
T10339
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
basb Bacillus sp. SB49
Pathway
basb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
basb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M662_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
basb03019
]
M662_02140
03009 Ribosome biogenesis [BR:
basb03009
]
M662_02140
Enzymes [BR:
basb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M662_02140
Messenger RNA biogenesis [BR:
basb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M662_02140
Ribosome biogenesis [BR:
basb03009
]
Prokaryotic type
rRNA helicases
M662_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
SUa-2TM
DUF4240
AAA_22
PRC2_EED_ins
Cas3-like_C_2
PIN_2
Motif
Other DBs
NCBI-ProteinID:
QHT48573
UniProt:
A0A7Z2YC78
LinkDB
All DBs
Position
404871..406283
Genome browser
AA seq
470 aa
AA seq
DB search
MGFEETTPIQEQTIPLGLEGKDVIGQAQTGTGKTAAFGIPMLEKINKQVKAVQGLVIAPT
RELAIQVAEELNRLGKGKGVRVLPIYGGSNMERQIRALKNNHIVVATPGRLLDHIRRKTI
KLESVHTAVLDEADEMLNMGFIDDIRDILKALPEERQTLLFSATMPKEIRDIATTLMNSP
EEVKVKAKEMTVENIEQFFVEIPEKHKFDTLTRLLDIHDPSLAIVFGRTKRRVDEVADGL
QARGFSAEGIHGDLTQGKRMSTLNKFKRGRIEILVATDVAARGLDISDVTHVYNFDIPQD
PESYVHRIGRTGRAGRKGKSISFVTPREKDQLHLIEKITKKKVERLKVPSSEEAARGQQK
VAVEKLLEMIEKNDLKNYKQAADELLQQHDSTDLIAAALKMMTKERSEVPVRLSHVQPIS
VKNAQRDKSKKKGGYRGGGNRNFNSKNKSRNRNFNGKGGKQRSFQSKGRS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgaagaaaccacaccaatccaagaacagaccatccctctaggacttgaaggg
aaagacgttattggccaagcgcagacaggtacggggaagacggcggcattcggtattccg
atgctggagaaaatcaacaaacaggtgaaagccgttcaaggtcttgtcatcgccccgaca
agggaactggctattcaggtagcagaggaattgaaccgactaggtaaagggaaaggtgtc
cgtgtccttccgatttacggtgggtccaacatggaacgccaaatccgcgccctgaagaac
aaccacatcgtcgttgcgacacctggtcgtctacttgaccacatccgtcgtaaaacgatt
aaattggaaagtgttcacacagcggttcttgatgaagcggacgaaatgctgaacatgggc
ttcatcgatgatatccgtgacattcttaaggcccttccggaagaacgccaaacgcttctg
ttctccgcaactatgccgaaagagattcgtgatatcgcgacaacgctgatgaacagcccg
gaagaagtaaaagttaaagcaaaagaaatgactgtggaaaacatcgagcagttcttcgtg
gaaattccggagaagcataagttcgatactttgactcgtcttcttgatatccatgatcct
tctttggcaatcgtcttcggccgtacgaaacgccgtgttgacgaagttgctgacggtctt
caggcacgcggcttcagtgcagaaggaatccacggagatttgactcaaggaaagcgtatg
tccacattgaacaagttcaagcgcggacgtattgaaatccttgtggcgacagacgtagca
gcacgtggtctggatatttccgatgtaactcacgtgtacaacttcgatattccgcaagat
ccggaaagctatgttcaccgtatcggccgtacaggacgtgctggtcgtaaaggtaaatca
atttctttcgtcacaccgagagagaaagaccaactgcacttgatcgaaaagatcacgaag
aagaaagtagaacgtttgaaagttccttcttctgaagaagcagcgcgtgggcagcagaaa
gttgcggtcgagaagcttctggaaatgatcgagaagaatgatctgaagaattacaagcag
gcggcggatgagctgcttcaacagcatgattccacagacctgatcgctgcagcactgaag
atgatgacgaaagaacgcagtgaagttccggttcgtctatctcatgttcaaccgatcagc
gtgaagaacgcccagcgtgataagagcaagaagaagggcggctaccgtggtggcggtaac
cgtaacttcaacagtaagaataaatcccgcaaccgtaacttcaacggtaaaggcggaaaa
cagcgcagcttccaaagtaaaggccgcagctga
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