Bacillus sp. SB49: M662_17745
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Entry
M662_17745 CDS
T10339
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
basb Bacillus sp. SB49
Pathway
basb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
basb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M662_17745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
basb03019
]
M662_17745 (recQ)
03400 DNA repair and recombination proteins [BR:
basb03400
]
M662_17745 (recQ)
Enzymes [BR:
basb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M662_17745 (recQ)
Messenger RNA biogenesis [BR:
basb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M662_17745 (recQ)
DNA repair and recombination proteins [BR:
basb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M662_17745 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QHT48765
LinkDB
All DBs
Position
3412473..3414608
Genome browser
AA seq
711 aa
AA seq
DB search
MQQAEKILQQYYGYSSFRPGQEEVIQHVLHGHNTLAVMPTGGGKSLCYQIPGLTLDGTAV
IISPLISLMKDQVDALLSYGVPATYINSSLSAREQQERMTAIRQGRYSFVYVAPERMEAP
DFLNLLSSIPLSLIAFDEAHCISQWGHDFRPSYRSIVPTLRTIPNLPVVMALTATATKEV
IEDIKRLIDVPEEAVVNTGFARENLSFRVIKGRDKRDFVETYLQKVPEDAGIIYTATRKD
ADQLHTYLSEKGYASGKYHAGMTENQRRQTQMDFVQDKVTTMVATNAFGMGIDKSNVRYV
IHYSMPMNIESYYQEAGRAGRDGEPGDCVLLFTSQDINLQRFLIDQSPSEKKRTAEYDKL
QAMINYCHTHTCLQQYILDYFDNPVPVEPCGKCSNCMHEGQKTDMTKEAQMVLSCVKRMG
ERFGASLTAKVLRGSKDQKVKQFRFDSLSTYGIMSNYTEKELTRFIHFLTAEGYLYPGSG
RYPTLQLTQEAKKVIKGEEPVIMLVEAVVTKTKADYNVEYFEELRRLRKQIAEQESLPPY
VIFSDATLKDLTAYLPETKDNMLKIKGIGEQKYQKYGEAFLEMIQPWAKAAADKPRPSSS
SPSAPIKRDPGDDRPSHIISYEMWKLEEQTPKEIAEARGMSQLTIESHLFRAAKEGYDIN
WPSWFDEQQETSVLEAYEQLEDKKLKPLKDMLPDTYSYSAIKAVLVKHDLV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcggaaaaaatactacagcaatattacggctattcctctttccggccaggg
caggaagaagtaattcaacatgtccttcatgggcataacacgctcgcagtcatgccgaca
ggcggagggaagtcactctgctatcaaatccccgggctcacactagatggtactgccgtg
atcatctcccctctcatttcattgatgaaggaccaggtcgacgctctcctatcctatgga
gtaccggcgacttacatcaacagctccctctccgcacgagaacagcaggaacgcatgact
gccatccggcaaggaagatattcttttgtgtacgtcgcaccggagcggatggaagcaccg
gatttccttaatctactttcctccatcccgctgtccttgatcgctttcgacgaggcccac
tgcatatcgcaatggggacatgacttccgcccaagctaccgatcgatcgtccctactctc
cgtaccataccgaacctcccggtggtcatggcattgacagctacggccacgaaagaagta
atcgaagatattaagcgcctcatcgatgtgccggaagaagccgtcgtcaacacaggtttt
gcccgtgaaaacctatccttccgggtcatcaaaggacgcgataagcgtgacttcgttgaa
acatatttgcagaaagttccggaggatgccggcatcatttataccgctactcgtaaagat
gctgaccaactgcatacatacttatcggaaaaggggtatgcttccgggaagtatcatgct
gggatgacggagaaccagcgtagacagacacagatggattttgtccaggacaaggtgacc
accatggttgctacgaacgcttttggaatggggattgataaatccaacgtccgttacgtg
atccactactccatgccgatgaatattgaatcgtattatcaggaagccggtcgtgccggt
cgggatggagaaccgggagactgcgttctgcttttcaccagtcaggatatcaacctccag
cgctttttgattgatcagtctccttctgaaaagaagcggacagctgaatacgataaactt
caggctatgattaattactgccacacccacacgtgcctgcagcaatatatccttgactat
ttcgacaatccggtacctgtggagccatgcggaaaatgttcgaactgtatgcatgaaggg
cagaagacggatatgacgaaagaagctcaaatggtgctgtcctgtgtgaagaggatgggg
gaacggttcggtgcctcccttaccgcgaaggtgcttcggggatcgaaggaccaaaaagta
aagcagtttcgtttcgattccttgtctacctatggaatcatgtccaactatacggaaaaa
gaattgacgcgctttattcattttctcaccgcagaaggttatctgtaccccggttccggc
cgttacccaaccttacagctaacccaggaggctaagaaagtaattaaaggagaagaacct
gtaatcatgctggtggaagccgtcgtcacaaaaacgaaggctgattacaacgtagaatac
tttgaagaattacgccgtttacgcaagcagatagccgaacaagaatccctgccgccttat
gtcattttctctgatgcgactttgaaggacttgaccgcttatctcccggaaacgaaagat
aacatgttgaagataaaaggtatcggggaacagaaatatcagaaatacggggaagcattt
cttgaaatgattcagccatgggcaaaagccgcggcggataagccacggccttcctcctct
tccccctctgctcctataaagagagacccaggtgacgatcgaccgagtcacatcatcagt
tacgagatgtggaaactcgaggaacagacgccaaaggagatagctgaagccaggggcatg
agtcaacttaccattgagagccatttgttccgtgcagccaaggaaggctatgatatcaac
tggccaagctggtttgatgagcaacaggagacctctgtactggaagcctatgaacaattg
gaggataagaagcttaaacctttaaaagacatgcttccggacacttacagctattctgcc
atcaaagctgttttagttaaacacgatttagtataa
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