Bacillus sp. SD-4: LCG60_00145
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Entry
LCG60_00145 CDS
T10885
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
basd Bacillus sp. SD-4
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
basd03016
]
LCG60_00145 (truB)
Enzymes [BR:
basd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCG60_00145 (truB)
Transfer RNA biogenesis [BR:
basd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCG60_00145 (truB)
Prokaryotic type
LCG60_00145 (truB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UBR30360
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All DBs
Position
complement(23235..24158)
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AA seq
307 aa
AA seq
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MEGVVLLHKPKGMTSHDCVFKLRKILREKRIGHTGTLDPDVTGVLPICVGRATKIAQFLT
SETKTYEGEVTLGFSTTTEDASGEVVETKHVDRVITRKEVEGALAALTGTIEQMPPMFSA
VKVNGKKLYEYARAGQEVERPVRTITIHEFVLLDDREVFEGETISFRFRVTCSKGTYVRT
LAVMIGEKLGFPSHMSHLVRTASGEFLLEDCISFEEIEENVQNGTVESIFISIDEALSKF
PKMVVDEKQAEKIKNGMFLKNELQITAPFITVFDKNDRCLAIYEHHPKHPGMLKPMKVLV
NNQELKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtagtattattacataagccaaaaggcatgacatcacacgattgtgtattt
aaattaagaaagatattgcgtgaaaaacgaattggtcatacaggaacattagatccagat
gtaacaggagtattgcctatttgtgttgggagagcaacgaagattgcacaatttttaaca
agtgagacgaaaacatatgaaggtgaagtaacacttggattttcaacaacaactgaagat
gcttctggtgaagttgtggaaacgaaacatgtagatcgtgttattactcgtaaggaagta
gaaggggctcttgctgcattaacaggtacgattgaacaaatgcctccgatgttttcggct
gtaaaagttaacgggaaaaaattatatgaatatgcaagagcaggacaagaagttgaacgt
ccagttcgtacaattacaattcatgaatttgtattactagatgaccgtgaagtgtttgag
ggagaaactatttcattccgtttccgtgtaacgtgtagtaaaggaacatatgtaagaacg
ttagccgtaatgattggggaaaaacttggttttccatcacatatgtctcaccttgtaaga
acggcttctggtgaatttttattagaggattgcatatcatttgaagaaattgaggaaaac
gtgcaaaatggaacagtagagtctatctttatttcaattgatgaagcattaagtaaattc
ccaaaaatggttgtagatgaaaagcaagcagaaaaaataaagaatggtatgttcttaaaa
aatgaattgcaaataacggcgccgtttataacagtgtttgataaaaacgatcgctgcctt
gcaatttatgagcaccatccaaagcacccaggtatgctaaagccgatgaaagtacttgtg
aataatcaagaactaaagctataa
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