Bacillus sp. SD-4: LCG60_00680
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Entry
LCG60_00680 CDS
T10885
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
basd Bacillus sp. SD-4
Pathway
basd00550
Peptidoglycan biosynthesis
basd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LCG60_00680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
basd01011
]
LCG60_00680
Peptidoglycan biosynthesis and degradation proteins [BR:
basd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LCG60_00680
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
UBR30463
LinkDB
All DBs
Position
complement(135259..137175)
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AA seq
638 aa
AA seq
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MRVSNVTVRKRLIFILISGILIFTIIDIRLGYVQFFLGNMLTDRAKDSWSRNITFEPERG
KILDRNGVELATNKSAPTVFVVPRQIEKPAETAEKLAAVLGVEKDEIYKRITKKESIVRL
DKGGRKISHDKAKEVRGLSLKGVYIAEDSIRYYPFGNFLSHVLGFAGSDNQGLMGLEKYY
DKELNGDEGHVRFFADAKGQRMPNVGDDFKKPEAGLNLGLTIDARINRIMEREMNIAEST
YNPDGMIAIAMNPKNGEILGMSSRPSFDPADFQSVSPEVYNRNLPVWSTYEPGSTFKIIT
LAAALNENLVDLEKDTFYDDGAAEVGGARLKCWKAGGHGSQTFLEVVQNSCNPGFIELGE
RLGKERLFKYIRNFGFGQKTGIDLQGEGSGILFNLDKVGPVEQATTSFGQGVSVTPIQQV
AAVAAAVNGGTLYQPYIAKEFIDPKNNQVVSKKTPVDKRKVISKETSEKVRYALENVVAK
GSGKGAFIDGYRVGGKTGTAQKVKDGKYLENNYIVSFIGFAPADDPEIVVYVAVDNPKGV
TQFGGVVAAPIVGNILRDALPVMGVKPRKEQVEREYKWGDIPTVEVPNLIGMKKKDLQTQ
LVDLKLDISGDGEKVIKQSPEAGAKVKEGSKIRIYFGN
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtatcaaatgtaacggttagaaaacgacttatttttatacttatatcaggtata
cttattttcactatcatcgatattcgtcttggatatgtgcaattttttcttggaaatatg
ttaacggatcgtgcgaaagattcatggagtcgtaatattacttttgaacctgagcgtggg
aagattttagaccgaaatggtgtggaacttgctacgaataaaagtgctccaactgtcttt
gttgtaccgaggcaaattgaaaaaccagcagagactgcagagaagttagctgcagtatta
ggtgtggaaaaagatgagatttataagagaattacaaaaaaagaatcaattgtaaggtta
gataaaggcggaaggaaaatatcacatgataaagcgaaagaggtaagaggattaagtttg
aaaggtgtttatatcgcagaggactctatccggtactatccatttggcaactttttatca
cacgtattagggtttgcaggtagtgataaccaaggtcttatgggactagaaaaatattat
gataaagaactaaatggtgatgaaggtcatgtgcgtttttttgcagatgcaaaaggacaa
aggatgcctaatgttggcgatgatttcaaaaaaccagaagctggtttgaatttaggctta
acaattgatgcacgtattaatagaattatggaaagagaaatgaatattgcagagtcgaca
tacaatccagatggtatgattgcgattgcgatgaatccgaaaaatggcgaaattttaggt
atgtcgagtcggccgagctttgatccagcagattttcaaagtgtttctccagaagtgtac
aatagaaatttaccagtatggagtacgtatgagccgggttcaacatttaaaatcattacg
ttagccgcagctttgaatgaaaatttagtagacttagagaaagatacgttttatgatgat
ggagcagctgaagttggtggagctagattgaaatgctggaaagcaggaggccacggtagc
cagacgtttttagaagtagttcaaaactcttgtaacccaggatttattgaactgggtgag
cgtcttggtaaagaacggttgtttaaatacattcgtaatttcggctttggacagaaaact
ggaattgacctgcaaggtgaaggtagtgggattttatttaatttagataaagtcggtcca
gtcgagcaagcgacaacttcattcggtcaaggtgtttctgttacgccaatccaacaagtg
gcggcggtagcagcggctgtaaatggtgggacattgtatcaaccgtatatagctaaagaa
tttatagatccgaaaaacaatcaagttgtaagtaaaaagacacctgtggacaaaagaaaa
gttatttccaaggaaacttcagaaaaagttcggtatgcattagagaatgttgtagcaaag
ggatctggtaaaggtgctttcattgatgggtaccgtgtaggtggaaaaacaggtacggcc
caaaaagtgaaagatggtaaatatttagagaataattatatcgtatcttttatcggtttt
gctccagcagatgatccagaaattgttgtttatgtagctgttgataatccgaaaggtgta
acgcaatttggtggagtagtagcagctccaattgttggaaatattcttcgggatgcactt
cctgttatgggagtgaaaccgagaaaagaacaggttgagagagaatataaatggggcgat
ataccaactgtggaagttccaaatttaattggtatgaaaaagaaagatttacagacgcaa
ctcgtcgatttgaagcttgatataagtggagacggagaaaaggtcattaaacagtcccca
gaagcaggagctaaagtgaaagaaggctcaaaaattagaatttacttcgggaattaa
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