Bacillus sp. SD-4: LCG60_02000
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Entry
LCG60_02000 CDS
T10885
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
basd Bacillus sp. SD-4
Pathway
basd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCG60_02000 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_02000 (xseB)
Enzymes [BR:
basd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LCG60_02000 (xseB)
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LCG60_02000 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF3867
Motif
Other DBs
NCBI-ProteinID:
UBR30719
LinkDB
All DBs
Position
complement(375242..375472)
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AA seq
76 aa
AA seq
DB search
MENKLSFEEAISQLGHLVSKLEQGDVPLEEAISYFKEGMELSKLCDEKLKNVQEQMAVIL
GEDGELEPFTALGDEA
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaattaagctttgaagaggcaatttcgcaacttgggcatctcgtttctaag
ctagagcaaggtgacgtacctttagaagaagcaatttcttattttaaagagggtatggaa
ttatctaagctttgtgatgagaagttgaagaacgtacaagaacaaatggcagttattctt
ggggaagatggagagcttgaaccgtttactgctttaggagatgaagcatag
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