Bacillus sp. SD-4: LCG60_04040
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Entry
LCG60_04040 CDS
T10885
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
basd Bacillus sp. SD-4
Pathway
basd00920
Sulfur metabolism
basd01100
Metabolic pathways
basd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LCG60_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_04040
Enzymes [BR:
basd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LCG60_04040
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LCG60_04040
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LCG60_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UBR31108
LinkDB
All DBs
Position
complement(761731..762663)
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AA seq
310 aa
AA seq
DB search
MHEQILGAIKEFDTIIIHRHVRPDPDALGSQGGLSTILQESFPEKNVYTVGYNEPSLAYL
RVMDEIEDSVYENALVIVCDTANQERVDDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTA
SSTSEMIYEFYNYGKDKGLQITKEAARLILAGIVGDTGRFLFPNTTAKTLRYVSELVDMD
VKFTDLYNEMYKTKEKIARLNGYILQNFTMVEEGAAYIKLTKEVLEKFDVLPSEASGVVG
ALGNIDGLKAWVLFLEEDDVIRVRLRSKGPVINKLAMQYNGGGHPMASGAKASSWEEADR
LFADLREICK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcaaattttaggagcaattaaagagtttgatacaattattattcatcgtcat
gtgcgtccggatccagatgcgttaggttcacagggcggtcttagtaccattctacaagaa
tcgtttccagagaaaaatgtttatacggttgggtacaatgaaccgtcattagcatattta
cgagtaatggatgagattgaagatagtgtatacgaaaatgcgcttgttatcgtttgtgat
acagcaaaccaagaacgtgttgacgatcaacgctatacaaaagggaagatgttaatcaaa
attgatcatcatccaaatgaggatccatacggagatattacgtgggtagatacgacagca
agttctacaagtgaaatgatttatgagttttataattatggaaaagataaaggattacaa
ataacaaaagaagcagctcgtcttattttagcgggtattgttggggatacaggacgtttc
ttattcccgaatacaacagcaaaaacacttcgttacgtaagtgagcttgttgatatggat
gtgaaattcacggatttatacaatgaaatgtataagacgaaagaaaaaatcgctcgttta
aacggctatattttacaaaactttacgatggtagaagaaggagcagcttacattaaatta
acgaaagaagtattagaaaaatttgatgtacttccttctgaggcatccggtgttgttgga
gcacttggtaacattgatggattaaaggcgtgggttctatttttagaggaagacgatgtg
attcgtgttcgtcttcgttcaaaaggaccagttataaataaattagcaatgcaatataac
ggcggaggacatccgatggcttctggtgcaaaagcatcttcttgggaagaagcggatcgt
ctatttgctgatttacgtgagatttgtaaataa
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