Bacillus sp. SD-4: LCG60_09015
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Entry
LCG60_09015 CDS
T10885
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
basd Bacillus sp. SD-4
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
basd03000
]
LCG60_09015
Transcription factors [BR:
basd03000
]
Prokaryotic type
Helix-turn-helix
Other families
LCG60_09015
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_2
AAA_5
AAA
AAA_3
HTH_30
AAA_22
Mg_chelatase
GAF_2
HTH_psq
AAA_16
Rap1_C_Sp
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UBR32007
LinkDB
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Position
1671015..1672865
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AA seq
616 aa
AA seq
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MLASPFYLHTWKKFVDEGVLDSNRINERISESWHRCKEANVDPHINKGQKILSSNIFQDQ
KKKSEIFLDIAIPQIQNMRKTIDELQMMALLIDPDGYVLSLSGNEQTLKRAKHINFIEGV
KWTEAAVGTNAIGTALEIEEAIMISGTEHYSVASHSWSCAAAPIHNDDGKLIGVLDFSCP
IEFSHPYMLGMVTSIAHAIERECSIRVHQNELHLIHRFLDVIDSDEQVVICNHRDVIVSA
SKRVRERVCNWSRMKLADLMHFGLKTKLEVPIYSNNRMIGKCIYVKENKQVKSFSTFPFI
NGITFPGVIGTSSAFQHTLEEIKLVSPTDASVYVCGETGVGKEYVARAIHENSPRKNGPF
IAVNCGALPKELMESELFGYAEGAFTGARRQGYKGKFEQADGGTIFLDEIGEVPPEMQVA
LLRVLQERTVTPIGSSIEVPVNIRIITATHKDLLRLVEEGKFRQDLYYRLHVYPLYVPSL
IERKEDIPYFIQQFCERKNWNIVFPKSICNQFALHTWPGNIRELLNVLERIYILSQGREI
CEKQISFLLQTIMGNQHQLELQTENKTENTLNFREKIQRDSMIEALEKTNGNVSLAAKLL
DVPRSTFYKRMQKYKL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttagcttcaccgttttacttacatacatggaaaaagtttgttgatgaaggagtcctt
gattcgaaccgtataaacgaaagaatttcagagtcatggcatcgatgtaaagaagcaaat
gtggatcctcatataaataaaggtcagaaaattttgtcttctaatatttttcaagaccaa
aagaaaaagagtgaaatcttcctagatatagcaatacctcaaatacaaaatatgagaaaa
accattgatgaactgcaaatgatggcattattaattgatccagatggttacgttctatcg
ttaagtggaaatgaacaaacattgaaacgagcaaaacatattaacttcattgaaggtgtg
aaatggacggaagcagctgttggtacaaatgcaataggaaccgcgcttgagattgaagag
gctattatgataagtggtacagagcattattctgtcgcatctcatagctggagctgtgcg
gccgctcccattcataacgatgatgggaaattaattggcgttctagatttctcctgtcca
attgaattttcgcatccatatatgctcggaatggtaacttcgattgcacatgcgattgaa
cgtgaatgtagtattcgagtacatcaaaatgaactgcatttaatccatcgttttttagat
gtaattgacagtgatgaacaagttgtaatttgtaatcatcgtgatgttatcgtttctgca
agcaagagggttcgggaacgagtatgtaattggtcacgaatgaaacttgcagatttaatg
cactttggattgaaaactaaattagaagttccaatatacagtaataatagaatgattggg
aaatgtatttatgtaaaggaaaataaacaagtaaaatcattttcaacgttcccatttata
aatggcatcacttttcctggagtgattgggacaagtagtgcatttcagcatacattagaa
gaaattaagcttgtatcaccaactgacgcaagtgtatatgtttgtggtgaaacaggtgta
ggaaaagaatatgtagcgagagcgattcatgaaaatagtccaagaaaaaatggtcctttt
atagctgttaactgcggtgcattaccgaaagaattaatggaaagtgaattgtttggttat
gctgaaggggcgtttacaggtgcacggcgtcaaggatataaagggaaattcgaacaagca
gacggaggaacaatatttttagatgaaattggtgaagtgcctccagagatgcaagtagca
ttattacgtgttttacaagaacgaacagtaaccccaattggcagttcaatagaggtgcca
gttaatattcgtattattactgcgacacataaagatctattgcgattagtagaagaaggg
aaattccgtcaagatttatattatcgtttacatgtttatccactatatgttccatcgtta
atagaaagaaaagaggatattccgtacttcatacaacaattttgtgaacggaagaattgg
aatattgtatttccgaagagtatttgtaatcaatttgcgcttcatacatggcccggaaat
attcgggaattattaaatgtattagaacgcatatacattttgtcgcaaggacgggaaata
tgcgaaaaacaaatctcttttttattacaaacaataatgggaaatcaacatcagcttgaa
ttgcaaacagaaaataaaacagagaacacattgaatttccgtgaaaaaatacagcgtgat
agcatgattgaagcgctagaaaagacgaacggaaatgtttccttggctgcaaaactttta
gatgtaccccgtagtacattttataaacgaatgcaaaaatataagttataa
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