Bacillus sp. SD-4: LCG60_09705
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Entry
LCG60_09705 CDS
T10885
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
basd Bacillus sp. SD-4
Pathway
basd00470
D-Amino acid metabolism
basd00550
Peptidoglycan biosynthesis
basd01100
Metabolic pathways
basd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LCG60_09705 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LCG60_09705 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LCG60_09705 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
basd01011
]
LCG60_09705 (ddlB)
Enzymes [BR:
basd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LCG60_09705 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
basd01011
]
Precursor biosynthesis
Amino acid ligase
LCG60_09705 (ddlB)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
GARS_A
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_LDMS
Motif
Other DBs
NCBI-ProteinID:
UBR32129
LinkDB
All DBs
Position
complement(1802369..1803283)
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AA seq
304 aa
AA seq
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MRIGVIMGGVSSEKQVSIMTGNEMIAHLDKNKYEIVPITLNEKMDLIEKAKDIDFALLAL
HGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNMSKKILRYEGIETPDWIELTKMED
LNFDELDKLGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGDEI
TCSIFDGKQLPIISIRHAAEFFDYNAKYDDAGTIEEVIELPAELKERVNKASLACYKALK
CSVYARVDMMVKDGIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLRVRK
EEGF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagaattggcgttattatgggaggagtatcctctgaaaaacaagtatcaattatgact
ggaaatgaaatgattgcacatttagataaaaataaatatgaaatagtaccaattacgtta
aatgaaaaaatggatttaatcgaaaaagcgaaagacattgattttgcactgctcgcatta
catggaaaatacggagaagatgggacagttcaaggaacgcttgaaagtttaggtattcct
tatagcgggagcaatatgttatctagcggtatatgtatggacaaaaacatgtcaaaaaag
attttacgttatgaaggaatagaaacaccagattggattgaacttacaaaaatggaggat
ttgaattttgatgagctagataagttaggatttccattagtggtaaaaccaaactctggt
ggttcaagtgttggggtaaagattgtctatgataaagacgaattaatttcaatgctggaa
actgtgttcgaatgggattctgaagtagtaatagaaaagtatattaaaggtgatgagatt
acatgttccatttttgatggaaaacagttacctatcatttcaattcgacatgcggctgag
ttctttgattacaatgcgaaatatgatgatgcaggtactattgaagaagttatcgaactt
ccagctgaacttaaggaacgtgtaaacaaagcgtcactggcttgctataaagcattaaaa
tgtagtgtttatgcaagggttgatatgatggtgaaggacggtattccatatgtaatggag
gttaatacattaccagggatgacacaagcaagtttactacccaaaagtgcagatgcagcg
ggaattcattatagtaaactattagatatgattattgaaacttcattaagagtaagaaaa
gaagaagggttttaa
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