Bacillus sp. SD-4: LCG60_10425
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Entry
LCG60_10425 CDS
T10885
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
basd Bacillus sp. SD-4
Pathway
basd03018
RNA degradation
Brite
Enzymes [BR:
basd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LCG60_10425
Messenger RNA biogenesis [BR:
basd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCG60_10425
Ribosome biogenesis [BR:
basd03009
]
Prokaryotic type
rRNA helicases
LCG60_10425
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UBR32256
LinkDB
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Position
complement(1955612..1956964)
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AA seq
450 aa
AA seq
DB search
MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFV
LPILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK
LKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSK
QTMLFSATMPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMD
RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA
TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE
KTLGAPIQREIIEQPKIKRVDENGKPLPKPAPKKSGEYRQRDSREGSRSGSKGRTRSDSR
NSSRNENNRSFNKPSNKKGSTKQGQQRRGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggtctatttgaaaaactttttagaattaggaattagtgaaacttttaatcatacatta
cgtgaaaatggaattacagaagcaacaccgattcaagagaaggcaattcctgttatactg
tcaggtaaagatattattgggcaggcgaaaacaggaacgggtaaaacgttagcattcgtg
ttaccgattttagaaaaaatcgatccagagtctagtgatgttcaggctttaattgttgca
ccaacaagggaactagctctgcaaattacaactgaaattaaaaaaatgcttgttcaaaga
gaagatattaatgtattagcgatttatggtgggcaagatgtagcacaacaattgagaaaa
ttaaaaggtaatacacatattgttgtagcgacaccaggacgattattagatcatatacga
cgtgaaacaattgatttaagtaatctgtcaacgattgtactagatgaagcggatcaaatg
ctttatttcggtttcttatatgatattgaagatattttagatgagacacctggtagtaaa
caaacgatgttattctcagcaacgatgccaaaagatattaaaaaattggcgaagcgttat
atggatgagccgcaaatgattcaagtacaaagtgaagaagtaacggtagatacaattgag
cagcgtgtcattgagacgacagatcgtgcaaagccagatgcacttcgttttgttatggat
cgtgatcagccatttttagcagttattttctgtcgtacaaaggttagagcaagtaagctg
tatgataatttaaaaggactaggttataattgtgctgaacttcatggtgatatacctcaa
gcgaaacgtgaaagagttatgaagagtttccgagaagctaaaattcagtacttaatcgca
acggatgtagcagctcgtggacttgatgtagatggtgtaacgcacgtatttaactatgat
atccctgaagatgtagagagttatattcaccgcattggccgaacaggacgtgcaggtgga
tcaggtcttgcaattacgttcgttgcagcgaaagatgaaaaacatttagaagaaattgaa
aaaacgcttggcgcaccaatacaaagagaaataatcgaacaaccgaagataaaacgtgta
gatgaaaatggaaaaccactaccaaagccggctccgaagaaatcaggcgaatatcgtcaa
agagatagccgtgaaggttcaagaagtggttctaaaggtcgcacaagaagcgattcaaga
aatagttcaagaaatgaaaacaaccgatcatttaataagccaagtaataaaaaaggtagt
acaaagcaaggccagcaaagacgtggccgttaa
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