Bacillus sp. SD-4: LCG60_15185
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Entry
LCG60_15185 CDS
T10885
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
basd Bacillus sp. SD-4
Pathway
basd03420
Nucleotide excision repair
basd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCG60_15185
03430 Mismatch repair
LCG60_15185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_15185
Enzymes [BR:
basd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCG60_15185
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCG60_15185
MMR (mismatch excision repair)
Other MMR factors
LCG60_15185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UBR27998
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All DBs
Position
2880591..2882657
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AA seq
688 aa
AA seq
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MTQEKFSQKSLTHADIPRATYHIPKTSTHLIMEEDTDAAYFRALEQQNVFLNEKQLEAVR
TTEGPVLTLAGAGSGKTSVLTTRVGYLVNVKQVHPRNILLLTFTQKAAEEIRNRVANLPG
MNHAASSYVVAGTFHSVFLKLLRSQGYNQQILANEKHKQIMIKKILKELRLKDAYDAETM
LAMISLEKNKLNRPKDVKAKTPVEQEFKEVYERFEEVKQRYNYIDFDDILLETYYMLENN
APLLTQLQQRFHYIEVDEFQDTSYAQYEIVKLLASPRNNLFIAGDDDQAIYGWRGASHQI
ILSFPKEFDNTTIIALNTNYRSNPFIVGLGNEVIKLNQERFDKELYSVREEGVQPFYARP
ATTLDEANQILQLIQEKVDSGERNYKDFCLLYRTHSVSRSLLDQLTIHKIPFIKHGASQS
FYEHSLIKPVLDHLRLVIEPFRLESLSNILPTMYIGRDDCISFIEREQWKYGEGRFPSLL
HFLLLNPSLKPFQVKKVNERIDFIKFIKELEPKKALKEIIHGKGKYLEYLQSNDRSSFTM
HKDIQEEMLEELMESANRFTDIPAYLQFVDEAIQGQKEMEALKTMPQKDAVSLMSIHNAK
GLEFPCVFLLGASDGILPHTSSLKDANDRVTETSEALEEERRLLYVAITRAKEELYISSP
QFFRGKKLDISRFLYTVRKDLPKKTSTK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagaaaaattttcacaaaaatcattaacgcacgctgatattccacgtgcaaca
tatcatattccaaaaacatctacccatttaattatggaagaagatacagatgcagcgtat
tttcgcgctctcgaacagcaaaatgtatttttaaacgaaaaacaattagaagccgtacga
acgacagaaggtcctgttcttacactggctggtgccggaagcgggaaaacatctgtttta
acaactcgcgtaggttatttagtaaatgtaaaacaagttcatccgcgaaatattttatta
cttacatttacacaaaaagcggctgaagaaatccgaaatcgcgtagcgaatttaccgggt
atgaatcatgcggcaagtagctatgttgttgccggtacgtttcactctgtctttttaaaa
ttgcttcgtagtcaaggatataatcagcaaattttagcaaacgaaaaacataaacaaatt
atgataaagaaaattttaaaagaattgcgtttaaaagacgcttatgatgctgaaacgatg
ctcgcgatgatttcacttgagaaaaacaagttgaatcgcccgaaagatgtaaaagcaaaa
acacctgttgaacaagaatttaaagaagtatacgagcgttttgaagaagtgaaacaacga
tataactatatcgatttcgatgacattttattagaaacatattatatgttagaaaataat
gctcctttgcttacccaattacaacaacgttttcactatattgaagtagatgagttccaa
gatacatcgtatgcacaatatgaaattgtaaaattgttagcttcgccaagaaataatttg
tttatcgcaggtgatgacgatcaggcaatatatggctggcgaggagcaagtcaccaaatt
attttatctttcccaaaagaatttgataacactacgattattgcccttaatacgaattat
cgatccaatccttttattgtcggacttggaaatgaagttatcaaactaaatcaagagcgt
tttgataaagagctatattctgtacgcgaagaaggtgtacaacctttttacgcaagaccg
gctacgactcttgatgaagcaaaccaaattttgcagctcattcaagaaaaggtagatagc
ggtgaacgaaactataaagatttttgtttactatatcgcacacattctgtaagccgttcg
ttacttgatcagcttaccattcataaaatcccgttcattaagcacggcgcaagtcagtca
ttttatgaacattctttaattaagcctgtattagaccatttacgactcgtaattgagccg
tttcgattagaatcactttcaaatatattaccaacgatgtatatcgggcgtgatgattgt
atttcatttattgaacgtgaacaatggaaatatggtgaaggtcgttttccttctcttctt
catttcttattattaaatccaagcttaaaaccttttcaagtgaaaaaggtaaatgagcgt
atcgattttattaaatttataaaagaattagaaccgaaaaaagctttaaaagaaattatt
catggtaaaggaaagtatttagagtacttacaaagtaacgatcgttcttcctttacgatg
cataaagatatacaagaagaaatgttagaagaattaatggagtcggcaaatcgtttcacc
gacattccagcttatttacaatttgttgatgaagccattcaagggcaaaaagaaatggaa
gcattaaaaacaatgccgcaaaaagatgctgtttcgcttatgtctattcataacgcaaaa
ggtcttgaatttccatgcgtctttttacttggagcgagcgatggtattctgccccacact
tcttctttaaaagatgcaaatgatcgtgttacagagacttctgaagctttagaagaagaa
cgccgactactttatgtcgcgattacacgtgcaaaggaagaactgtacatttcctctccg
caattttttagaggaaaaaaattagacatatctcgttttttatacactgtgcgaaaagat
ttacctaaaaagacatccactaaataa
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