Bacillus sp. SD-4: LCG60_18755
Help
Entry
LCG60_18755 CDS
T10885
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
basd Bacillus sp. SD-4
Pathway
basd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCG60_18755 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_18755 (uvrB)
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCG60_18755 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCG60_18755 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_30
AAA
AAA_22
DUF1280
UFL1
Kinesin
HH_RND_rel
UB2H
AAA_16
TrwB_AAD_bind
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UBR28665
LinkDB
All DBs
Position
complement(3560241..3562217)
Genome browser
AA seq
658 aa
AA seq
DB search
MERQFEIVSAYSPQGDQPVAIEKLVEGINSGKKKQVLLGATGTGKTFTISNVIKEVQKPT
LVMAHNKTLAGQLYSELKDFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDAQINDEID
KLRHSATSALFERDDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEKDRNQLLRELVDVQ
YGRNDIDFKRGTFRVRGDVVEIFPASLDEHCIRIEFFGDEIDRIREVNALTGEVLAERDH
VAIFPASHFVTREEKMKVAIENIEKELEERLKELNDNGKLLEAQRIEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGATPYTLLDYFPEDFLIVMDESHVSVPQVRAMYNGDQARKQV
LVDHGFRLPSALDNRPLTFDEFEEKTNQVIYVSATPGPYELEQSPEVIEQIIRPTGLLDP
PIDIRPIEGQIDDLLGEIQDRIAKNERVLITTLTKKMSEDLTDYLKDVGIKVNYLHSEVK
TLERIEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNENGRVIMYADRITRSMGIAIEETKRRRSIQEAYNEEHGITPKTIQKGVRDVIRATT
AAEEPETYEATPAKKMTKKEREKTIAKMEAEMKEAAKALDFERAAELRDLLLELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtcaatttgaaattgtctcagcgtattccccgcaaggtgatcagccggtagct
atagagaagcttgtagagggaattaatagtggaaagaaaaagcaagtgttgcttggggcg
acaggaacgggtaagacatttacgatttcaaatgtcattaaagaagtgcaaaagccaacg
cttgtcatggctcacaataaaacgttagcaggacagttatatagtgagttgaaagacttt
ttcccgaataatgcagttgaatattttgttagttattacgattattatcagccagaagcg
tatgtgccacaaacagatacgtttattgaaaaagacgcacagattaatgatgaaattgat
aaattacgtcactcagcaacgtctgcattatttgaacgggatgatgtaattattgttgcg
agtgtttcgtgtatatatggtttaggttctccagaagaataccgcgagttagttgtttca
cttcgagttggtatggaaaaggaccgcaatcaattgcttcgtgaacttgttgatgtgcag
tatggacgtaatgatattgatttcaagcgtggtacattccgtgtgcgcggagatgtagtt
gaaatcttcccggcatcacttgacgagcattgtattcgaattgagttttttggcgatgaa
attgatcgtattcgcgaagtaaatgctttaacgggggaagtattagcagaacgtgatcat
gtagcaatcttcccagcatctcacttcgttacacgtgaagaaaagatgaaggtcgctatt
gaaaatatcgaaaaagaattagaagagcgtttaaaggaattaaatgataacggtaagttg
ttagaagcgcagcgtatagaacagcgtacacgttatgatttagaaatgatgcgcgagatg
ggcttttgttcagggattgaaaactattcccgtcatttaacacttcgtccagcgggtgca
acgccgtatacgttattagactatttcccggaagatttcttaatcgttatggatgagtcg
cacgtatcagtgccgcaagtaagagcgatgtataacggggaccaagcgcgtaagcaagtg
cttgtggatcatggattccgtcttccatcagctttagataatagaccgctcacatttgat
gagtttgaagagaaaacgaatcaagttatttacgtttcagcaacgccaggaccgtatgaa
ttagagcagtcgccagaagtaatagaacaaattattcgtccaacagggcttttagatccg
ccaattgatatacgaccaattgaagggcagattgacgatttattaggagaaattcaagat
cgcattgcaaaaaatgaacgtgtattaattacaactttaacgaagaagatgtcagaggat
ttaacagactacttaaaagatgtaggaattaaggtgaattatctgcattctgaagtgaaa
acgttagaacgtattgaaattatacgagatcttcgccttggtaagtttgatgttcttgtt
ggtattaacttattgcgagaaggattagatattccagaagtatcccttgtagctatttta
gatgctgataaggaaggattcttgcgttcagagcgttcgttaattcaaacaattggccgt
gcagcacgtaatgaaaacggccgcgttattatgtacgcagatcgtataacgagatcgatg
ggaattgcgattgaagaaacgaagcgtcgtcgtagtatacaagaagcttacaatgaagag
catggtattacgccaaaaacgattcaaaaaggtgtgcgtgatgtaatccgtgcaacgaca
gctgctgaagagccggaaacatatgaagcaacgccagctaagaagatgacgaaaaaagag
cgtgaaaagacaattgcgaagatggaagcagaaatgaaagaagcagcaaaagcgttagac
ttcgagcgtgcagctgaattaagagatttactattagaattaaaagcggaagggtga
DBGET
integrated database retrieval system
