KEGG   Bacillus sp. SD-4: LCG60_19625
Entry
LCG60_19625       CDS       T10885                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
basd  Bacillus sp. SD-4
Pathway
basd03030  DNA replication
basd03430  Mismatch repair
basd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:basd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LCG60_19625
   03430 Mismatch repair
    LCG60_19625
   03440 Homologous recombination
    LCG60_19625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:basd03032]
    LCG60_19625
   03400 DNA repair and recombination proteins [BR:basd03400]
    LCG60_19625
Enzymes [BR:basd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LCG60_19625
DNA replication proteins [BR:basd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LCG60_19625
DNA repair and recombination proteins [BR:basd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LCG60_19625
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1 DEDDh_C MKLP1_Arf_bdg
Other DBs
NCBI-ProteinID: UBR28826
LinkDB
Position
3722954..3723901
AA seq 315 aa
MGNISLPLDYVVIDFETTGFNPYNDKIIQVAAVKYRNHELVDQFVSYVNPERPIPDRITS
LTGITNYRVSDAPTIEEVLPVFLAFLHTNVIVAHNASFDMRFLKSNVNMLGLPEPQNKVI
DTVFLAKKYMKHAPNHKLETLKRMLGIRLSSHNAFDDCITCAAVYQKCASIEEEAKRKLN
KKALDETVVYEAVKEILVRNKRDIEWIRCMNVGSYLDIKAFYPVMRLKVKGRKKYVLTDI
LEDDVKEICTSLACEPALKSEVGNTRIMLNSLEDVLKLESYILEQYDFVLQALRDYKQSE
MSADEKLKEYLNIMV
NT seq 948 nt   +upstreamnt  +downstreamnt
gtggggaatatatccttaccgttagattatgttgtaattgactttgaaacaacaggattt
aacccttataatgataaaatcattcaagtggcagcagtgaaatatcgtaatcatgaacta
gtagatcaatttgtttcctatgtgaatccggagcgtccaatcccggatcgaataacgagt
ttaacaggtattacaaattatcgtgtttcagatgcaccgacgattgaagaagtgttacct
gtatttttagcatttttacatacaaatgtaattgtcgctcataacgcttcttttgatatg
cgctttttgaaaagtaacgtcaatatgcttgggttaccggaacctcaaaataaagtgatt
gatactgtatttttagcgaagaaatatatgaagcacgcacctaatcataaacttgaaacg
ttaaagagaatgctcggaattcgtttaagctctcataatgcatttgatgattgtattacg
tgtgcagctgtttatcaaaaatgtgcatctattgaagaagaggcaaaaaggaaattgaat
aagaaagcacttgatgaaacagtagtatatgaagcggtaaaagagatacttgtacgaaat
aaacgtgatatcgaatggattcgttgcatgaatgtagggagctatttagatataaaagct
ttttatccagttatgagattaaaggtaaaagggcgaaagaaatacgtattaacagacata
ttagaagatgatgtgaaagaaatatgtacgagtttagcatgtgaaccggcattaaaaagt
gaagttggtaatacgagaattatgctgaatagcttagaggatgtcttgaaattagaaagt
tatattttagaacagtatgatttcgtactgcaagcgctgcgtgattataaacaaagtgaa
atgagtgcagatgaaaagttaaaagagtatttaaatattatggtataa

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