Bacillus sp. SD-4: LCG60_21000
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Entry
LCG60_21000 CDS
T10885
Symbol
colA
Name
(GenBank) collagenase ColA
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
basd Bacillus sp. SD-4
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
basd01002
]
LCG60_21000 (colA)
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
basd02042
]
LCG60_21000 (colA)
Enzymes [BR:
basd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
LCG60_21000 (colA)
Peptidases and inhibitors [BR:
basd01002
]
Metallo peptidases
Family M9
LCG60_21000 (colA)
Bacterial toxins [BR:
basd02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
LCG60_21000 (colA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
ColG_sub
PKD_4
PKD
PPC
Peptidase_M61
K319L-like_PKD
AF0774
FMP23
Motif
Other DBs
NCBI-ProteinID:
UBR29094
LinkDB
All DBs
Position
complement(4027570..4030467)
Genome browser
AA seq
965 aa
AA seq
DB search
MNKKSKINKVMLSISTMALSLGALQAPASAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAE
ETLSFQERLKVGDFSQRPAPITNKATVKQVKESYSMADLNKMNDQELVETLGSIKWHQIT
DLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKGIQTFTEVLRSAFYLAFYNNE
LSELNERSFQDKCLPALKSIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI
LKQYNDNFTMYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDRFINEIN
RIALLNEVTQENKWLVNNGIYFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQ
ITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSIVFKTGDKVSEEKIKRLYWAA
KEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT
FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFA
GSTRTNNVVPRKSIISGLSSDPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETF
DKIQDLIRANDVKNYDAYRENLSKDLKLNEGYQEYMQQLIDNQDKYNVPEVADDYLAEHA
SKSLTAVEKEITEMLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE
ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDGENKAPTVNINGPYNG
IVKEGIQFKSDGSKDEDGKIVSYLWDFGDGSTSAEVNPVHVYESEGSYKVALIVKDDKGK
ENRSETTVTVKDGSLTESEPNNRPEEANRIGLNNTIKGSLIDGDHTDVYTFNVASAKNID
ISVLNEYGIGMTWVLHHESDMQNYAAYGQANGNHIEANFNAKPGKYYLYVYKYDNGDGTY
ELSVK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaatcaaagattaataaagttatgcttagcattagtacaatggctctatca
ttaggggcgcttcaagctcctgcatcagcggaagaaaaagtaccgtataatgtgttgaaa
acgaaaccagttggaattgaaaaaccagtagatgagattggacacgtttctaaagcggag
gaaacattatcgtttcaagaacggttaaaagtaggagacttttcacagcgaccagcacct
attaccaacaaagcgacagtaaagcaagttaaagaaagctattcaatggctgatttaaac
aaaatgaatgatcaagaattagttgaaacgttaggcagtattaagtggcaccaaattaca
gacttattccagtttaatgaagatgcaaaagccttttataaagataaaggaaaaatgcaa
gtcgttatagatgaattagctcatcgggggagtacatttacgaaagatgattcaaaagga
attcaaacgtttacggaagtgctacgttcagctttttatctggcattttataataacgaa
ttaagtgaattaaatgaaagaagtttccaggacaaatgtttacctgctttaaaatctatc
gcaaaaaatccaaactttaagcttggtacagctgaacaagatacagtcgtatctgcatac
ggtaaattaattagtaatgcgtcaagcgatgttgaaacagttcaatacgcatcgaatatt
ttaaagcaatacaatgataattttactatgtatgtaaatgatcgaatgaagggacaagca
atatacgatattatgcaagggattgactatgatatacagtcttacttaattgaagctcgt
aaagaagcaaatgaaacgatgtggtacgggaaagtagataggtttattaatgaaataaat
cgtatcgctcttctaaatgaagtaacacaagaaaataagtggctcgttaataatggaatt
tattttgcaagtcgtttagggaagtttcacagtaatccaaataaaggtttagaagttgtt
acacaagcaatgcatatgtatccgcgcttaagtgagccgtactttgtcgcagtagaacaa
attacaacaaattataatggaaaagattatagcgggaatacagtagatttagagaaaata
cgtaaagaaggaaaagagcagtacttaccaaaaacgtatacatttgatgatggatctatc
gtatttaaaacaggagataaagtatcggaagaaaaaattaagagactatactgggctgca
aaggaagtaaaagcacagtatcatcgtgtaattgggaatgacaaagcgttagagccgggc
aatgcagatgatatattaacgatagtaatttataacagtccagaagagtaccagttaaat
agacaactgtatggatacgaaacaaataacggtggaatttatattgaagaaacaggaaca
ttctttacatatgagcgcacgccagaacaaagcatttatagtttagaagagttattccgt
catgagtttactcattatcttcaagggagatatgaagtgccaggtttattcggaagagga
gatatgtatcaaaatgaaaggttaacttggttccaagaaggaaatgcagagtttttcgca
gggtctactcgaacaaataatgtagtgccgagaaagagcatcattagtggattatcatcc
gatcctgcaagccgttatacagcagagcgcacattatttgctaaatatggttcttgggat
ttctataattactcgttcgcattacaatcttacttatatacacatcaatttgaaacgttt
gataaaattcaagatttaattcgtgcgaatgacgtgaaaaattatgatgcctatcgtgag
aatttaagtaaagaccttaaactaaatgaagggtatcaagagtatatgcagcagctaatc
gataatcaagataaatataatgtaccggaagtagcagatgattatttagctgaacatgca
tcaaaatcattaacagcagtagagaaagaaattactgaaatgttgccgatgaaagatgca
aaaatgacaaaacatagctcccaattctttaatacatttacattagaaggtacgtataca
ggtagtgtaacaaaaggtgagtcagaagattggaacgcaatgagtaagaaagtaaatgaa
gctttggaacaactggcgcaaaaagaatggagtggctataaaactgttacagcatatttc
gtcaattaccgtgtaaatagctcaaatcaatttgaatatgatgtagtcttccacggtatc
gcaaaagatgacggagaaaataaagctccaacggttaatataaacggcccttataatgga
attgtaaaagaaggtattcaatttaaaagtgacggctcaaaagatgaagatggaaaaatc
gtttcttatttatgggactttggagatggaagcacaagtgcagaagtaaatccggtacat
gtatatgaaagcgaaggttcatataaagtagcgttaatagtaaaagatgataaaggaaaa
gagaacagaagcgaaacaacggttacggttaaagatggaagtttaacagaatcagaacca
aataatcgcccagaggaagcaaatcgtattggactaaacaatacgataaaaggtagcctt
atcgacggggatcacactgatgtttatacatttaatgtagcatcagcgaaaaatattgat
atttccgttttaaatgagtatggaatcgggatgacatgggtacttcaccatgaatcagat
atgcaaaattatgctgcttacggtcaagcaaatggaaatcatatagaggcaaactttaat
gcaaaaccaggtaagtattacttgtatgtatataaatatgataatggtgatggaacatac
gaattatcagtaaaataa
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