Bacillus sp. SD-4: LCG60_22950
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Entry
LCG60_22950 CDS
T10885
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
basd Bacillus sp. SD-4
Pathway
basd03420
Nucleotide excision repair
basd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCG60_22950 (pcrA)
03430 Mismatch repair
LCG60_22950 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_22950 (pcrA)
Enzymes [BR:
basd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCG60_22950 (pcrA)
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCG60_22950 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LCG60_22950 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBR29444
LinkDB
All DBs
Position
4398676..4400919
Genome browser
AA seq
747 aa
AA seq
DB search
MSMTDRLLNGLNPQQQRAVQTTNGPLLLMAGAGSGKTRVLTHRIAYLLGEKGVAPWNVLA
ITFTNKAAREMRERIDTLVGPEAEDIWISTFHSMCVRILRRDIDRIGINRNFTILDSGDQ
LTVVKKIMKERNIDPKKFEPRSILAGISNAKNELLSADKYAKKITIADPYEKLTSDVYTE
YQKRLLKNNSLDFDDLIMTTIQLFERVPEVLEFYQRKFQYIHVDEYQDTNKAQYLLVKHL
AARFKNLCVVGDSDQSIYRWRGADISNILSFEKDYENAQVILLEQNYRSSQNILNAANAV
IERNTNRKPKKLWTDNEVGSKISYYRAATEKDEAYFVAKKIRDDIQMGKRKYTDFAVLYR
TNAQSRMVEEIFLKSNIPYKIVGGTKFYDRKEIKDILAYLRLIGNPDDEISFARIINVPK
RGIGATSIDKIINYGVQNGISLTAVFDEIEHVGVSAKVTKAVKEFAGLLHNWVNMQEYLS
VTELVEEVIEKTGYRDMLKNERTLEAEGRLENLDEFLSVTQTFESQSEDKSLVAFLTDLA
LVADIDRVDEDPTAGEEVILMTMHSAKGLEFPVVFIVGLEEGIFPHTRSLMEEDEMQEER
RLAYVGITRAEEELYLSNAQMRTLFGRTSMNAASRFITEIPTELVESLNETAPKRETSFG
AKGRVASSSKTTTTTRSRSAFARPAAKTTGGEQIGWAVGDKASHQKWGVGTVVSVKGEGD
AKELDIAFPSPIGVKRLLAKFAPVTKQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgacagataggttattaaatggtttaaatccgcagcaacaaagagcagtacaa
acaacgaacggaccacttctattaatggcaggcgcaggtagtggtaaaacacgtgtgtta
acacatcgtattgcgtatttacttggtgaaaaaggagtagcaccgtggaatgtactagct
attacctttacaaataaagccgctcgtgaaatgcgcgagcgtattgatacacttgtcgga
ccagaagccgaagatatttggatttctacgttccactctatgtgtgtacgtattttacga
cgtgatatcgatcgcattggtattaatcgtaactttacaattttagattcgggtgatcag
ttaactgtggtcaaaaaaattatgaaagagcgcaatattgatccgaagaaatttgagccg
cgctctattttggctggtattagtaatgcgaaaaatgaattgttatctgcggataagtat
gcaaagaaaattacaattgctgatccatatgaaaaattaacgagcgatgtatatacagaa
tatcaaaaacgtcttttgaaaaataactcattagactttgatgatttaattatgacgacg
attcaactatttgaacgtgttccagaagtactagagttttatcagcgcaaattccagtat
attcacgtggatgagtatcaagatacgaacaaagcgcagtaccttcttgttaaacatttg
gcagcacgttttaaaaatttatgcgttgtaggtgactcagatcagtcaatttatcgctgg
cgtggtgcggacatttccaacattttgtcattcgaaaaagactatgagaatgcgcaagtt
attctgttagaacaaaattatcgttcgtcacaaaatattttaaatgcagcgaatgctgtt
attgaaagaaatacgaatcgtaaaccgaagaagttatggacagataatgaagttggaagc
aaaatctcgtactatcgtgctgcaacggaaaaggacgaggcgtactttgttgcgaaaaaa
attcgcgacgatattcaaatgggaaaacgaaaatatactgatttcgcagtgctatatcgt
acaaatgcgcagtctcgtatggtcgaggagattttcctgaaatctaatattccttacaaa
attgtcggcggtacgaagttctacgaccgtaaagagattaaagacattttggcgtattta
cgtttaattgggaatccagatgatgagattagttttgcgcgtattattaacgtgccaaag
cgcggaattggtgcgacttctatcgacaaaattattaattatggtgtacaaaatggaatt
tctttaactgctgtattcgatgagattgagcatgttggagtaagtgcaaaggttacaaag
gcagtaaaagaattcgcaggtttattacacaattgggtaaatatgcaagagtatttatct
gttacagaattggtagaagaagtgattgaaaaaacaggctatcgcgatatgttgaaaaat
gagcgtacgttagaagcggaaggtcgtctggagaacttagatgagtttttatctgttacg
caaacatttgaatctcaaagcgaggataagagccttgttgcattcttaacagacttagca
cttgttgcagatattgatcgtgtagatgaagacccaactgctggtgaggaagttatttta
atgacgatgcactcagcgaaagggttagaattcccagttgtctttattgttggtttagag
gaaggaatattcccacatactcgttctctaatggaagaagatgaaatgcaagaagagcgt
cgtcttgcttatgtaggtattactcgtgcggaagaagagttgtatttatcaaatgcacaa
atgcgtactttatttggtagaacaagtatgaatgccgcatcgcgatttattacagaaatc
ccgacagaactagtagaatcattaaatgaaacagcaccgaagcgtgaaacttcgtttggt
gcaaaaggaagagtggcaagtagcagtaaaacgacaactacaacacgttctcgctcagct
ttcgcacgtcctgcagctaagacgacaggcggcgaacaaattggctgggcagtaggcgat
aaagcttcccaccaaaaatggggagtcggtacagttgtaagtgtaaaaggtgaaggtgat
gcaaaagaattagatattgcgttcccaagcccaattggtgttaaacgtttgttagcaaaa
tttgcacctgtgacgaaacaatag
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