Bacillus sp. SD-4: LCG60_24410
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Entry
LCG60_24410 CDS
T10885
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
basd Bacillus sp. SD-4
Pathway
basd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
basd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCG60_24410 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
basd03400
]
LCG60_24410 (alkA)
Enzymes [BR:
basd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LCG60_24410 (alkA)
DNA repair and recombination proteins [BR:
basd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCG60_24410 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
AlkA_N
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UBR29703
LinkDB
All DBs
Position
complement(4690797..4691708)
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AA seq
303 aa
AA seq
DB search
MTAEYSNALTLTVPTEFSFQENLRYLSRSSNECMFHIEDNKIYKVISVHDVKPLVEISMN
ADDTIQIRFLGEAYISAKPIRDAVANYVTEWFDLTTDLAPFYTLAKHDVLLQRPIEQYYG
LRTLGIPDLFEALSWGIIGQQINLTYAYTLKRRLVETFGSYVEWNDRKHWIFPSPETIAN
LHVEDLKNLKMTTRKCEYLIGIAKLITEGKLSKESLLQIQDVKQAEKRLTAIHGIGPWTA
NYVLMRCLRFPSAFPIDDVGLHNAIKYLTGSESKPTKHEIKDFAVNWKNWESYAIFYLWR
ILY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaatatagtaacgcattaactttaacagttccaacagaatttagttttcaa
gaaaatttacgctatctatcccgttctagcaatgaatgtatgttccacattgaagataac
aaaatttataaagttatctctgttcacgatgtaaagcctttagtcgaaattagtatgaat
gcggatgatactattcaaatacgttttttaggagaagcctatatctctgcaaaaccgata
cgcgatgctgtagctaactatgtaactgaatggtttgatttaactactgatttagctccc
ttttatacattagctaaacatgatgtactccttcaaagaccaattgaacaatattatggc
cttcgtactttaggtattccagacttatttgaggcactttcctggggaattatcgggcaa
caaattaacctcacatatgcttatacactaaaaagaagattagtcgagacatttggaagt
tatgtagaatggaacgatagaaagcattggatattcccatcacctgaaacaattgccaat
ttacacgtagaggatctcaaaaatttaaaaatgacgactagaaaatgtgaatatttaatc
ggtattgcaaagcttattacagaaggaaaattatcaaaagaatctttactgcaaatacaa
gacgtgaaacaagctgaaaaaagattaactgctatacatggtataggaccgtggacggcc
aactatgttttaatgcgttgtttacgatttccttctgcttttccaattgacgatgttggt
ttgcataatgcaattaaatatttaacaggttctgaaagtaaaccgactaaacatgaaata
aaagattttgcggtaaactggaaaaattgggagtcttatgcgattttttacttatggcga
atattatactaa
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