KEGG   Bacillus sp. SD-4: LCG60_24480
Entry
LCG60_24480       CDS       T10885                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
basd  Bacillus sp. SD-4
Brite
KEGG Orthology (KO) [BR:basd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:basd03032]
    LCG60_24480
   03036 Chromosome and associated proteins [BR:basd03036]
    LCG60_24480
   03400 DNA repair and recombination proteins [BR:basd03400]
    LCG60_24480
DNA replication proteins [BR:basd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LCG60_24480
Chromosome and associated proteins [BR:basd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LCG60_24480
DNA repair and recombination proteins [BR:basd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LCG60_24480
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2530 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: UBR29717
LinkDB
Position
complement(4703354..4703626)
AA seq 90 aa
MNKTELIKNVAQNAEISQKEATVVVQTVVESITNTLAAGEKVQLIGFGTFEVRERAARTG
RNPQTGEEMQIAASKVPAFKAGKELKEAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaattaaaaacgtagcacaaaatgctgagatttctcaaaaagaa
gctactgtagttgtacaaactgtagtagaatcaatcactaacactttagctgctggtgaa
aaagtacaacttatcggattcggtacattcgaagttcgcgaaagagctgctcgtacaggc
cgtaacccacaaactggtgaagaaatgcaaatcgcagcttctaaagtacctgctttcaaa
gctggtaaagaactaaaagaagctgtaaaataa

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