Bifidobacterium asteroides: BAST_0006
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Entry
BAST_0006 CDS
T02271
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bast
Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bast03032
]
BAST_0006
03400 DNA repair and recombination proteins [BR:
bast03400
]
BAST_0006
Enzymes [BR:
bast01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BAST_0006
DNA replication proteins [BR:
bast03032
]
Prokaryotic type
DNA Topoisomerases
BAST_0006
DNA repair and recombination proteins [BR:
bast03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BAST_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFU70612
LinkDB
All DBs
Position
7455..10172
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AA seq
905 aa
AA seq
DB search
MADDNNNDNNPEQDGLNLPDGSREPLSPQEMDNTDYGLLKGERIQPIDLQQEMRESYLSY
ALSVIVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDAA
IYDTIVRLAQSWSMRYPLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVD
FIPNYDGKTQEPTVLPSRFPNLLVNGSAGIAVGMATNIPPHNLREVSKGVHWALEHPEAS
KEELLNALIAIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIRGRMCLVVT
ELPYQVNPDRLASSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLY
KHTQLQQTFGANMLALVDGVPRTLSLDAFIRHWVDHQLDVVERRTRYLKREAEDRDHILQ
GYLKALDMIDQVIALIRASKDVETARTGLMELLDVDEVQADAILAMQLRRLAALERQKIL
DEHEDLMRKIADYNDILAHPERQRTIVGDELDEIVDKYGDERRTRIVPYSGEMNVEDLIA
DEQVVVTVTHSGFVKRTKADEYRAQHRGGKGIRGARLREDDVVDHFFLTSTHNWLLFFTN
KGRVYRLKAYELPEGSRDSKGQHVANLLQLGQGERIEQVLSLHGYDDADYLVLATRTGRV
KKTRLDEYDSPRQGGLIAVRLMELGTVTDEEGQEVPQSDELVGAALCNADDEIILVSRKG
MSVRFSADDSTLRPMGRQTAGVQGMRFRPGDELLSMDVIAKESEDDLLVVTDEGFAKRTA
LSEYRLQGRNGYGVKAIAMVEGRGSLVGALVVNEDDQIMAIMKSGKVIRSDVAEVKRTGR
NTQGVTLAKPDKGDEILSIARNAERDDQEEDAGQTDLASAAPLAAKDQPIATTGTGDGQS
LTQED
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgataacaacaacgacaacaacccggaacaggatggcctcaacctgcccgac
gggtctcgagagccactcagccctcaggagatggacaacaccgactacggcctcctgaag
ggcgagcggattcagcccattgaccttcagcaggagatgcgggaatcctacctgtcctat
gccctgtcagtgattgtggagcgcgccctgcccgacgtccgcgacggcatgaagccagtg
caccgcagggtcatctacgccatgtatgacggtggataccggcccgaccgcggctacaac
aagtgctcgcgcgttgtaggcgacgtcatgggcaagtaccacccccacggcgatgcggcc
atctatgacaccatcgtgcgcctggcccagtcctggtccatgcgctatccgctggtggac
ggccagggcaacttcggctcccccggcgacgacccggcagccgccatgaggtacaccgag
tgccgcatggcccccttggccatggagatggtgcgcgacatcgacaaggatacggtcgac
ttcatccccaactacgacggcaaaacccaggagccgacggttctgccctcccgcttcccc
aacctgctggtcaacggatcggccgggatcgccgtgggtatggccaccaacattcctccg
cacaatctgcgcgaggtgtccaagggtgtgcactgggcactggagcatcccgaggcctcc
aaggaggagctgctcaacgctctgatcgccatcatcaaggggcctgacttccccacgggc
gccaccattcttgggcacaagggcatcgagcaggcctaccggacaggacggggcctgatc
accatgcgggcagtggtcaataccgaggagatccgcggaaggatgtgcctggtggtcacc
gaactgccctaccaggtcaaccccgaccggctggcctcgtccatccgcgaggccgtgcgc
gacggcaagatccagggcatcgccgacatgcgcgacgagacatcgggccgcaccggccag
cgcctggtcctggtgctcaagcgcgatgccgtgcccaaggtggttctcaacaacctttat
aagcacacccagctccagcagaccttcggggccaatatgctggccctggtggacggggtt
cccaggacgctgagcctggatgccttcatccgccactgggtggaccaccagctggacgtg
gtcgagcggcgcacacgctatctgaagcgtgaggccgaggatcgcgaccatatactgcag
gggtatctgaaggccttggacatgattgaccaggtcattgccctgattcgagcctccaag
gatgtagagactgcccgcaccggcctgatggagctgctggatgtggacgaggttcaggcc
gacgccatcctggccatgcagctgcgccgtctggccgccctggaacggcagaagatcctg
gatgagcacgaggatctcatgcgcaagatcgccgactacaacgacatcctggcccaccca
gagcgccagcgcaccatcgtgggcgacgagttggacgagatcgtcgacaagtacggtgac
gagcggcgcacccggatcgtcccttactcgggcgagatgaacgtggaggatctgattgcc
gacgagcaggtggtggtcaccgtcacccattccggcttcgtcaagcggaccaaggccgac
gagtaccgtgcccagcaccgcggcggcaagggcatccgcggggccaggctgcgcgaggac
gacgtggtggaccacttcttcctgaccagcacccacaactggctgctcttcttcaccaac
aagggcagggtgtaccggctcaaggcctatgaactgcctgagggttcccgtgactccaag
ggtcagcatgtagccaacctgctccagctgggccaaggcgagcggattgaacaggtcctt
tccctgcacggctacgacgatgccgactatctggtactggccacgcggacaggacgggtc
aagaagacccgcctggacgagtatgattcgccccgtcagggcggcctgatcgccgtgcga
ctgatggagctgggcaccgtcaccgacgaggagggacaggaggtgccccagagcgacgag
ctggtgggtgccgccctctgcaatgccgacgacgaaatcatccttgtctcccgcaagggc
atgagcgtgcgcttctcggcggacgactccactctgcggcccatgggacggcagaccgcc
ggcgtccagggcatgcgattccggcccggcgacgagttgctgagcatggacgtgattgcc
aaggagtccgaggatgacctgttggtggtcaccgatgagggctttgccaagcgaaccgcc
ctgagcgagtaccgcctgcagggccgcaacggttacggtgtcaaggccatcgccatggtg
gagggccgtggttccctggtcggcgccttggtggtgaacgaggatgaccagatcatggcc
atcatgaagtccggtaaggtcatccgttccgatgtggccgaggtcaagcggaccggtcgt
aacacccagggggtcaccctggccaagcccgacaagggtgacgagattctctccatcgct
cgtaatgccgaacgtgatgaccaggaagaggatgccggtcagaccgacctggcttccgcc
gctcccctggcagccaaggatcagcccatcgccaccaccggaaccggcgacggccagagc
ctgacccaggaggactga
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