Bifidobacterium asteroides: BAST_0485
Help
Entry
BAST_0485 CDS
T02271
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bast
Bifidobacterium asteroides
Pathway
bast03420
Nucleotide excision repair
bast03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAST_0485
03430 Mismatch repair
BAST_0485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bast03400
]
BAST_0485
Enzymes [BR:
bast01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAST_0485
DNA repair and recombination proteins [BR:
bast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAST_0485
MMR (mismatch excision repair)
Other MMR factors
BAST_0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AFU71077
LinkDB
All DBs
Position
678710..680179
Genome browser
AA seq
489 aa
AA seq
DB search
MLEGLDPAQRQAATVLDGPVRIVAGAGAGKTRTITRRMAYACASGSWEPSRTLAVTFSVR
AAAEMRDRLTKLGVSASLQAATFHSAALHQLRRVWPQVSETYPPDLIEDVGPLVSSTYQR
VCGQEADPGQVRDLTAEINWAKVGLIAPQDYVRVCSASHRLPPAGLEADRMADLYTVFEK
SKAAHNQMDFNDILLLVCHILEEGGQAAADIRDRIGWLTVDEYQDVSPLQHRLLKLWLNG
RQNLCVVGDPAQTIYSFAGATSYYLLNFPQEFPGIKADLDLSTDYRSTGRVVHYANGILA
RSPVRDDYLKLTSARPEGSRVAMTRYEDDGDEAGAVASRISSMIKKGARPGQFAILTRIN
AQQTLVCRALHERGIGYRVRTESGWQNQSVNLSKQEVLEQLEGGMGQGRVTVSTIHAAKG
LEFTHVFIVGCAEGLIPFGSPPEGDVLEEERRLMYVGVTRAEDTLHLSYAEHKDGSAFVR
RTPSRFIHR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgctggagggtctggatcccgcccagcggcaggctgctaccgtgcttgacgggcctgtg
cggattgtcgctggggccggggctggcaagaccaggaccatcacccggcggatggcctat
gcctgcgccagcggcagctgggagccatccagaaccctggcagtgactttttcggtccgt
gctgcagccgagatgcgcgatcgactgaccaagcttggcgtgtcggcctccctgcaggcg
gcgacctttcattcggcggccctgcatcagctcaggcgggtctggccccaggtcagcgag
acctaccctcccgatttgattgaggatgtgggccccctggtgtcctccacctaccagcgg
gtctgcgggcaggaggccgacccggggcaggtcagggacctgactgcggagatcaactgg
gccaaggtagggctgattgccccccaggactacgtacgggtctgctcagccagtcaccgc
ctgccaccggccggtctggaggctgatcggatggccgatctgtacacggtcttcgaaaaa
tccaaggccgctcataatcagatggacttcaacgacattcttctgctggtctgtcacata
ttggaagaaggtggccaggctgctgcagacatcagagaccgaatcggctggctgaccgtg
gacgagtaccaggatgtctcgcccctgcagcaccggctgctcaagctctggctcaacggc
aggcagaacctgtgcgtggtgggtgacccggcccagaccatctactcttttgctggggcc
acctcctactacttgctgaacttcccccaggaattcccgggcatcaaggctgatctggac
ttgtccaccgactaccggtccacgggaagggtggtccattacgccaacggcattctggcg
cgctcgccggtgcgtgatgactatctgaagctgacctcggcccgtccggagggcagcagg
gttgcaatgacccgttacgaggacgatggcgatgaggccggggccgtggcctcccgtata
tcctccatgatcaagaagggggcccggcccggccagtttgcaatcctgacgcggatcaat
gcccagcagaccctggtctgccgtgccctgcacgaacgtggaattggttaccgggtacgc
acggaatctggctggcagaaccagtcggtcaatctgagcaagcaggaggtgctggagcag
ctggagggcggtatgggccagggtagggtcacggtctccaccattcacgccgccaagggg
ttggagttcacccatgtcttcatcgtgggctgtgccgaggggctgattccctttggttca
ccgccggaaggggatgtcctggaggaggagcgccgtctcatgtacgtaggggtgacccgg
gccgaggacacactccacctctcctatgcggagcacaaggatggcagcgctttcgtccga
cgcacccccagccgattcattcaccgctga
DBGET
integrated database retrieval system
