Bifidobacterium asteroides: BAST_0639
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Entry
BAST_0639 CDS
T02271
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bast
Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BAST_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bast03021
]
BAST_0639
Transcription machinery [BR:
bast03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAST_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
CDC27
Hamartin
Motif
Other DBs
NCBI-ProteinID:
AFU71227
LinkDB
All DBs
Position
870353..871777
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AA seq
474 aa
AA seq
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MATKDTKSAKTAAVDTGKGRTSSTAGKTKTATRSKTSSSKASHKTSSRKTATASTSTAKT
NRRPASKTSKKVEEEPILQQEEQEPDEDLLEDQEDDDQLDKSEDQLEDEPDEDDQEEDEV
SRVEDEAEEDRKAAHALAAKVKGAFVVDDSDDDENVTPSGNPKRRVVTAGATADPVKDYL
KQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTEGEGMDFKRRRELKWAANDGKKAKDHL
LEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAI
TRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQK
YGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFQQVLETLSPREAGVI
KMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDSLDQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggacaccaagtcagccaagacagccgcagtggataccggaaagggcagg
accagttcaaccgccggcaagaccaagaccgccaccaggtccaagaccagcagcagcaag
gcgtcccacaagacctcgtcccgcaagaccgccactgccagcacttcgacggccaagacg
aaccggcgcccggcctccaagacctcgaagaaggtcgaagaggagcccattctgcagcag
gaggagcaggagcccgacgaggacctgcttgaggaccaggaggacgacgaccagctggac
aagagcgaggatcagctggaggacgaacccgatgaggacgatcaggaggaggacgaggtc
tcccgggtcgaggatgaggccgaggaggatcgcaaggccgcccatgccctcgccgccaag
gtcaagggtgcctttgtcgtcgacgattccgatgatgacgaaaacgtcaccccctcgggc
aatcccaagcgtcgtgtggtcaccgccggagccactgccgatcccgtcaaggactacctc
aagcagatcggccgcgtcagcctgctgaatgccgagcaggaggtggacctttccgagcgt
atcgaggccggcctctatgcccagcatctgctggacaccgagggtgaaggcatggacttc
aagcgtcgccgtgagctcaagtgggccgccaacgacgggaagaaggccaaggaccatctg
ttggaggccaacctgcgactggtggtctctctggccaagcgctacaccggcaggggcatg
ctcttcctggatctgatccaggaaggcaatctgggtctgatccgcgcggtggagaagttc
gactacaccaagggctacaagttctccacctatgccacttggtggattcgtcaggccatc
acccgcgccatggccgaccaggcccgcaccatccgtgtgcccgtccacatggtcgaggtc
atcaacaagctctcccgcgtccagcggcagatgttgcaggatctgggccgcgagcccact
cctgacgagctggcccgggagctggatatgcctgtcgagaaggtccaggaggtccagaag
tacggacgcgagcctatctccctgcatacccccctgggcgaggacggcgactctgagttc
ggcgatctgattgaggacaccgatgccatcgccccctcggatgccgtggccttctccctg
ctgcaagagcagttccagcaggttcttgagaccctgagtccccgtgaggccggcgtcatc
aagatgcgctacggcctggaggatgggcagcccaagaccctggatgatattggccgcgtc
tacggggtcacccgtgaacgcatccgccagattgagtccaagacaatgtccaagctgcgc
catccttcgcgctcgcagaccctgcgggattccctggatcagtga
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