Bifidobacterium asteroides: BAST_0675
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Entry
BAST_0675 CDS
T02271
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bast
Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bast03016
]
BAST_0675
Enzymes [BR:
bast01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BAST_0675
Transfer RNA biogenesis [BR:
bast03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BAST_0675
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFU71262
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All DBs
Position
919775..921061
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AA seq
428 aa
AA seq
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MTTDPQTQLLSEPAQGVPSVIDDMAGYRRACRMLSRGSGALAADAERASGFRYGHDDYLV
QFKRQGSGIFLLDPPALMQAGCDWSEFNKAVDGAQWIIHDSPQDLPGFYALGMRPSSLFD
TELAARMLNLGHYGLSAVTAHYLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLNQLR
TRELEDLRRHGKDEWARQEFAWLLGQGKVPKPKPEQPWRHISHINALHNDRRGLAVARSL
WTTRNRLARRYDIAPTLLLPDKAIIEAGRLKPHNNAQFRAIRSLNERVRIHTGGEQDRMF
ERYAPIQRRVRPSVWKQAILEALSLPTEKLPVPPKPRCEETNAPKSMQVWRHRHPDRFAR
LEAARKAVTEVGRRTNTPDEILIKPRYLRNLCWTDEPEQRDVADFLRQEGARPWQVSLLS
ESLTRAIM
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacggatcctcagacgcagctgctttcagagcccgcccagggtgtgccgtcggtc
atcgatgatatggccggataccgccgggcctgccggatgctctcccgggggagcggtgcg
ttggccgcggatgctgaacgggcctccggcttccgctatggccacgatgactacctggtg
cagttcaagcgccaggggtcggggatatttctgctggacccacctgctctgatgcaggcg
ggctgtgactggtctgaattcaataaggctgttgatggggcccaatggatcattcacgac
tcccctcaggatttgccgggcttctatgcgctgggcatgaggccctcatcgctcttcgac
accgagttggcggccaggatgctcaacctgggtcattatggtctgtctgcagtgaccgcg
cactacctggggctgacgttggccaaggaacactctgccgcagactggtcatatcgtcca
ctgccgcgcgattggcgcaattacgccgccttggacgtggaactgttgaatcagttacga
actcgcgaactggaggacctgcgccgtcacggcaaggatgagtgggccaggcaggaattc
gcctggctgctggggcagggcaaagttcccaagccgaagcccgagcagccctggcggcat
atctcgcacatcaacgccctgcacaacgaccgccgaggcctggccgtggcccgttccctg
tggaccacccgaaaccggctggcccgacgctacgacatcgctccgacgctcctcctgccc
gacaaggccatcatcgaggccggcaggctcaagccgcataacaacgcccaattccgggcc
atccggtccttgaacgagcgggtcaggatccacaccggcggcgagcaggaccggatgttt
gagcgctatgcccccatccagcgccgggttaggccctcggtctggaaacaggccattctg
gaagcgctgagtctgcccaccgaaaagctgccggtgcctcccaagcctcggtgtgaggag
accaacgcccccaagtccatgcaggtctggcggcaccgccatcccgaccggtttgccagg
ctggaggcagcgcgcaaggcggtgactgaagtgggacgccggaccaacacccctgacgag
attctgatcaagccccgctacctgcgcaacctctgctggactgacgaaccggaacagcgt
gacgtggccgacttcctgcgtcaggagggcgcccgcccctggcaggtttcgctcctgtca
gagtccctgactcgcgctattatgtaa
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