Bifidobacterium asteroides: BAST_0792
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Entry
BAST_0792 CDS
T02271
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bast
Bifidobacterium asteroides
Pathway
bast03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BAST_0792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bast03400
]
BAST_0792
Enzymes [BR:
bast01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAST_0792
DNA repair and recombination proteins [BR:
bast03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAST_0792
RecFOR pathway proteins
BAST_0792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
AAA_14
AAA_22
Mg_chelatase
nSTAND3
AAA_3
Zeta_toxin
TsaE
AAA_25
NTPase_1
AAA_18
RNA_helicase
IstB_IS21
Sigma54_activ_2
AAA_17
AAA_33
Rad17
NB-ARC
NPHP3_N
AAA_19
NACHT
ABC_tran
AAA_24
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AFU71376
LinkDB
All DBs
Position
complement(1049729..1050805)
Genome browser
AA seq
358 aa
AA seq
DB search
MADKQMTTGYIDSQNGDAQEESLRMVSARPIAGEPVSDEELRPENLDGFIGQPRLKAQLG
LFLEAAKKRDVAPDHILLAGPPGLGKTTLAMIVAHELDVPIRVTSGPAVQHAGDLASILS
SLEAGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATT
REGMLPSPLRARFGFTAHLDFYPQEELEKLVERSAKVLGIVLQDDAAHQLALRSRGTPRI
ANRLLRRVRDWAIVHDLPQVGPDDVKQALALYQIDSEGLDRLDLAVLEAIVNSFDGGPVG
LNNLAAMVGEEAETVETVCEPYLVREGFLVRTPKGRVATSKAWEHLGRKPPEDVMKLF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagcagatgaccacgggttacatcgattcccagaatggcgacgcccaggag
gaatccctgcggatggtctcggccaggcccatcgcgggcgaaccggtcagcgacgaggag
ctgagaccggaaaacctggacggattcatcggccagcccaggctcaaggcccagctgggg
ctcttcctggaggctgccaaaaaacgggacgtggcacccgatcacatcctcctggcgggc
cctcctggcctgggcaagacaaccctggccatgattgttgcccacgagctggatgtgccc
atccgtgtcacctcgggcccagccgtccagcatgccggcgacctggcctccatcctgagc
tccctggaggccggcgaggtgctcttcatcgacgagatccaccgtctgcccagggccgcc
gaggagctgctctacatcgccatggaggacttccgggtggatgtcatggtgggcaagggc
cccggagcctcctccattccgctgaccctgcccaggttcacggtcatcggcgccaccacc
cgtgagggcatgctgccatcgcccctgcgcgcccgttttggcttcaccgcacacctggac
ttctacccgcaggaggagctggagaagctggtcgagcgttcagccaaggtcttgggtatc
gtcctgcaggatgacgccgctcatcagctggccctgcgctcccgtggcacgcccaggatt
gccaaccgcttgctgcgccgtgtacgcgactgggccatagtccacgatcttccccaggtt
ggtcctgatgacgtcaagcaggccctggccctctaccagattgactccgaaggactggac
cgcctggatctggccgttctcgaggcgatcgtcaacagtttcgacggcggtcccgtgggc
ctgaacaacctggccgccatggtaggcgaggaggccgaaaccgtcgagacggtctgtgag
ccctacctggtgcgcgagggcttcctggtacgcacacccaaagggcgtgtagccacctcc
aaggcctgggagcacctgggccgcaaaccacccgaggatgtcatgaagctgttctag
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