Bifidobacterium asteroides: BAST_1056
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Entry
BAST_1056 CDS
T02271
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03437
RNA methyltransferase, TrmH family
Organism
bast
Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bast03016
]
BAST_1056
Transfer RNA biogenesis [BR:
bast03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
BAST_1056
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
MRM3-like_sub_bind
SpoU_sub_bind
PA
Motif
Other DBs
NCBI-ProteinID:
AFU71634
LinkDB
All DBs
Position
complement(1379040..1379993)
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AA seq
317 aa
AA seq
DB search
MLSTAGAKVVPMRFDDSLLDNPRAQRIRRLAELQDRRARQRHGRFLIEGPQSVREAVRWR
PELLTDLYIQADESFPVSKGGHPRPLNETVGAIVEQARELPDCYVHFVSSRVMRAISGNA
QGILAQARTDGFLAQSTDLEGSQRLTGEGPDLVAAFWQIRDPGNAGTVIRTADAAGCRAV
VLVDQCVEPTNPKVIRSTAGSAFHIPLVTMDTEDFLALCRRQGRTMVAADVYGTPDKPVR
LLTDLMAGGAQAKPDLAGQHMALLFGNEARGLPKELLQSMDQIVRIPLYGRAESLNLATS
AAVLLYAMAMSSRIERM
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgctctcgactgccggggctaaagttgtgcccatgcgctttgatgactccctcctcgac
aatccacgtgcccaacgaattcgtcgcctggctgaactgcaggatcggcgggcccggcag
cgtcatggccgcttcctgatagaggggccgcagagcgtgcgcgaggcggtccgctggcgt
cccgaactgctgaccgacctctatattcaggcggatgagtcctttcctgtatccaagggc
ggtcatccacgaccgctcaacgagaccgtgggcgccatcgtggagcaggctcgggagttg
cctgactgctacgtacacttcgtctcgtcccgggtcatgcgtgccatcagcggcaatgcc
cagggaatcctggcccaggcgcgtacggacggatttctggcacaatcgacggaccttgag
ggttcacagcgcctaacgggggaggggcccgacctggtggcggccttctggcagattcgt
gacccgggcaatgccggaaccgtcattcggaccgccgatgccgcaggctgcagggcggtc
gtactggtggatcagtgcgtggaacccaccaatcctaaggtcattcgctctacggccgga
tcggcctttcatatacccctggtgaccatggacactgaggacttcctggccctgtgcagg
cggcagggccggaccatggtggccgcggatgtctatggcacgccggacaaaccggtccgc
ttgctgacagacctcatggcgggcggtgcccaggccaagccggacctggctggtcagcac
atggctctgctctttggcaatgaggcacgcggattgcccaaggagttgttgcaatccatg
gatcagatcgtccgcatccctctatatgggcgggctgaatccctcaacctggccacctcg
gcggcggtgctgctttatgccatggccatgtcgagtcgtattgaaagaatgtga
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integrated database retrieval system
