Bifidobacterium asteroides: BAST_1309
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Entry
BAST_1309 CDS
T02271
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bast
Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bast03400
]
BAST_1309
DNA repair and recombination proteins [BR:
bast03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BAST_1309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
Rad51
AAA_16
AAA_22
ABC_tran
NACHT
EAD2
DUF7125
SLFN-g3_helicase
AAA
AAA_24
nSTAND3
NTPase_1
AAA_19
AAA_30
RecA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AFU71878
LinkDB
All DBs
Position
1672949..1674358
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AA seq
469 aa
AA seq
DB search
MAKTTTQYVCTECGWTGGKWFGRCPECGQWGTIEEFHEARVVGAGGGLSSSGGSHTAPAP
PRTGLARPITRVDTDQVKRIPTGFEEFDRVLGGGIVPGSVILLAGEPGIGKSTLLLETAG
RVADRGDERGKVLYISGEESQAQVRMRASRVGALKDSLLLASTTDLATVLGLIEREKPTL
AIVDSAQTIVSSQVDGIAGGSTQVREVAISLIDMAKSHDIPILLVGHVTKDGSIAGPRTL
EHLVDVVCQFEGDSQTALRLLRAVKNRFGPTDEVGCFDMGEQGIEEVSDPTGLFLSTAGQ
EVEGTCVTFTLDGHRSLPIEIQALVTSSVLPTPRRNTNGIDANRLAMLAAVLYRHGRVNL
LTRDLYVSTIAGGLAKEPGCDLAIVAALASAAKSRPILRTTCAMGEISLTGQVRPVPQLN
HRLQEAARLGFTRALVPPDRHSGGRKPIPGLEVVEVAYLAEALEALGLV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgacgacgcaatacgtgtgcacggagtgcggctggaccggcggcaagtgg
ttcggacgctgcccggaatgcggccagtggggaaccatcgaggaatttcacgaagcccgt
gtcgtaggtgcaggcggtggtctgtcctcctccggcggcagccatacagcaccggctcct
ccgaggaccggcctggcccgacccattacccgggtagacacggaccaggtaaagcggatt
cccacgggattcgaggagttcgaccgagttctgggcgggggtatcgtacccgggtcggtc
attctcttggccggtgagccgggcatcggcaagtccaccctcctgctggagaccgctggc
cgtgtggccgaccggggcgatgagaggggcaaagtgctctacatatccggcgaggagtcc
caggcccaggtgcggatgcgggccagtcgggtgggagcgctcaaggattcactgctgctg
gcttccacgaccgatctggctacggtgctggggctgattgagcgcgagaagccgacactg
gccattgtggactcggctcagaccatcgtctccagccaggtcgacggcatcgccgggggc
tcaacgcaggtgcgcgaggtggccatcagcctgatcgacatggccaagtcacacgacatc
cccatcctcctggttggccatgtaaccaaggacggctccatcgccgggccgcggaccctg
gagcatctggtcgatgtggtctgccagttcgaaggcgactcccagaccgccctgcgtctg
ctgagagcggtcaagaaccggttcggccccaccgacgaggtgggctgcttcgacatgggc
gagcagggcatcgaagaggtcagcgatcccacagggctcttcctgtccacggccgggcag
gaggtggagggcacctgcgtgaccttcaccttggacggccaccgcagtctgcccatcgag
atccaagctttggtcacctcctcagtcctgcccacgcccagacgcaacaccaacgggatc
gacgccaaccgcctggccatgctggctgcagtgctctaccgccacggccgggtcaatttg
ctgacaagggacctgtacgtgtccactatcgccggcgggttggccaaggagcccggatgc
gatctggccatcgtggccgccctggccagtgcagccaagtcccggcccatcctgcgcaca
acctgtgccatgggcgagatatcgctgaccgggcaggtcaggccggtgcctcagctcaac
caccggttgcaggaggccgctcgcctgggattcacccgggcgctggtcccacccgaccga
cattcaggaggacgaaagcccattccgggcctggaagtggttgaagtagcctatctggcc
gaggccctggaggctctgggactggtttaa
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