KEGG   Bifidobacterium asteroides: BAST_1314
Entry
BAST_1314         CDS       T02271                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bast  Bifidobacterium asteroides
Brite
KEGG Orthology (KO) [BR:bast00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bast03016]
    BAST_1314
Enzymes [BR:bast01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BAST_1314
Transfer RNA biogenesis [BR:bast03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BAST_1314
 Prokaryotic type
    BAST_1314
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C DKCLD PseudoU_synth_2 DUF1408
Other DBs
NCBI-ProteinID: AFU71883
LinkDB
Position
complement(1678268..1679353)
AA seq 361 aa
MKPTAEGIGGAGASESLDGMEFGTGEPISGIILVDKPSGVTSHDVVAAVRSVLGMRRVGH
AGTLDPMATGLLVVGFGQATRLLTVIVGHDKAYRATIRLGLGTTTDDADGDLLPVRPGAA
QNVDNLTAQGLQDLIDRCFTGWIDQVPDAFSAIKVQGRRAYDLARAGQEVKLEPRRIRIA
SFRLLDFRRVELPDQGTRVVDVDVEVICSSGTYIRALARDLGERLDLGGHLTALRRIRVG
PFDLEDSALKSKVVGGQVIPHTYRDRQGRTVIRSRMVPDHDRQGMLDGSLSLEQAARMSM
PVLNLDTDQAARVANGGFLHQPVAGPTAALAGPVGKQRLAAILVPGSRGGAKPDVVFHAE
T
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagccgaccgctgaaggcattggtggggcaggggcttccgagtcgctggatggtatg
gagtttggcaccggtgaaccaatctcgggcatcatccttgtcgacaagccgagcggtgtg
accagccatgacgtggtggctgccgtccgctctgtcctcggcatgcgtcgcgtgggccat
gccgggaccctggatcccatggccactggcctgctggtcgtagggttcggccaggccacg
cggttgttgacggtcatcgtcggccatgacaaggcctaccgggccaccatacgtctggga
ctgggtaccaccacggacgatgctgacggggatttgctgccggtgcgtcctggagccgcg
cagaatgtggacaatctgacagcccagggtctgcaggatttgattgatcgctgcttcacc
ggctggatagaccaggtgcctgatgccttctccgccatcaaggtccagggcagacgggcc
tatgacctggctcgcgcaggtcaggaggtcaagctggaacccagacgtattcgaattgca
tccttccgtctgctcgattttcgtcgtgtggaattgcccgaccaaggcaccagggtggtc
gatgtggatgtggaagtgatctgctccagcggcacctacatccgggccctggctcgcgac
ctgggcgagcggctggacctgggcggccacctgaccgccctgagaagaatccgggtaggt
ccattcgacctggaggattccgccctcaagtccaaggttgtgggcggtcaggtgatcccc
cacacctaccgggaccgacaaggtcggacggttattcgcagccgtatggtcccggaccat
gaccggcaggggatgttggatggctctctgagtcttgagcaggcggcacgcatgagcatg
cctgtcctcaacctggataccgaccaggccgccagagtggccaatggcggattcttgcat
cagcctgtcgccgggcccacggcagcactggccggacctgtgggcaagcagcgtctggct
gctatcctggtgcccggttcacggggtggggccaagccggatgtggtcttccacgccgag
acatga

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