Bifidobacterium asteroides: BAST_1321
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Entry
BAST_1321 CDS
T02271
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bast
Bifidobacterium asteroides
Pathway
bast03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bast00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAST_1321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bast03021
]
BAST_1321
03400 DNA repair and recombination proteins [BR:
bast03400
]
BAST_1321
Enzymes [BR:
bast01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAST_1321
Transcription machinery [BR:
bast03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAST_1321
DNA repair and recombination proteins [BR:
bast03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAST_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AFU71890
LinkDB
All DBs
Position
complement(1687513..1688508)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEVVNAQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTVAN
PDLHIATLAEDGELEIEFTVERGRGYVQAQLNKQDNDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPEPVV
EEADPQMSVPIEDLNLTQRSYNCLKREGIHTIGELVSHTEQDLLDIRNFGMKSIDEVKEK
LEGMGLSLKASPLGFDTNNLEGGTFFSPDDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgactcttactgaagaagtcgtcaatgcccagcgctcccgt
ttcaccatcgagcccttggaacccggattcgggtacaccctgggcaactccctgcgccgt
accctgctgagctccatacccggtgcggctgtgacctcggtccgcatctcaggtgccctg
cacgagttcaccacgctgcctggtgtggaggaggacgtcactgagatcctgctcaacatc
aaaggcatcgtgctgaccagtgaatacgacgagcctgtggtcatgtatttgcgcaagagc
ggcaagggcgaggccaccgccggggacatcaccccgccggccggcgtcaccgtagccaat
cccgatctgcatatcgcgaccctggccgaggatggcgagctggagatcgagtttacggtg
gagcgtggtcgtggatatgtccaggcccagctcaacaagcaggacaacgatgagattggc
cgtatcccggtcgattccatctattctcctgtgctcaaggtcagctacaaggtcgaggcc
acccgtgtcgagcagcgcacggatttcgacaagctgatcctggatgtggagaccaagccg
gctatttcgccgcgtgacgcggtggcgtccgctggctcgaccctggtcgagctcttcggt
ctctgccgcgagctcaacactcaggctgagggcgtggaggtcgggcccgagcctgtggtg
gaagaggccgatccgcagatgtccgtgccgattgaggacctgaacctgacgcagcgttcc
tacaactgcctcaagcgcgagggaatccataccatcggtgagctggtctcgcataccgag
caggatctgctggacatccgcaacttcggcatgaagtccatcgacgaggtcaaggagaag
cttgagggcatggggctgtcgctgaaggcctccccgctgggcttcgacaccaataatctc
gaggggggcaccttcttctcgcctgacgacgagtga
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