Borreliella tanukii: QIA26_02420
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Entry
QIA26_02420 CDS
T09341
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
batn
Borreliella tanukii
Pathway
batn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
batn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QIA26_02420 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
batn03021
]
QIA26_02420 (rpoB)
03400 DNA repair and recombination proteins [BR:
batn03400
]
QIA26_02420 (rpoB)
Enzymes [BR:
batn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QIA26_02420 (rpoB)
Transcription machinery [BR:
batn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QIA26_02420 (rpoB)
DNA repair and recombination proteins [BR:
batn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QIA26_02420 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WKC82535
LinkDB
All DBs
Position
complement(400400..403867)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRAEEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDTLNFTEKECKRKGQSYEAVLKVRLNLQFLATGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKKIKVEEDTKRDLPGQYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYDDVSGKYFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLSTSVLTMNDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVINGEVTDELEYLSAIDEEKKCIAQANAAFDSNGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVIKAKRSGEVILATSNKIVVKPFESENAKDLDEYHIVKYERTNQDTCFNQSVLV
KEGQKVERGEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgaggagattttagacttacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaaat
aaaaaacctttacttaatgaaggcctcgagtctgtttttagaaatatatttcccatcaaa
agtggaaatggtgatgttgctcttgagtatgaaagatattatatagaaaacgataccctt
aattttacagaaaaagaatgtaaaagaaaggggcaaagttatgaagctgttttaaaagta
agactaaatttgcaatttttggctactggggaaataaggcaaaaagatgtgtatatggga
actattcctttaatgacagaaaggggcacttttattattaatggggctgagagggttgtt
gtttctcagattcataggtctccaggagttgttttttataaagaaaaagatttatattct
gctagaataattccttatcgtggttcttggttagaatttgagattgattctaaaaaagat
tatctttatgtaaagatagatagaaaaaaaagaatactcataactctttttttaagagct
ttggggtttgatactagagaaaaaataatagaaactttttataacattaaaaaaattaaa
gttgaagaggacacaaaaagagatctcccaggtcaatatttagccaagagtattaacata
agagagaatatgtattatcgagcaggagataagattaccctacaagatgttgaagatttt
ttacaaaatggagtaaatgaaatagagcttgtcgattttgatggttatgatgatgtttct
ggaaagtattttgtgagttcgaatgttattttaaattgtcttgagaaagaagatgctttt
tttgccttaaaggatggttctaaagaacttccaaaagaatcagttatgcttgctgtttat
ggggcgctttttcctggcgagccaatatcgattgataatgctgaaaacgatttaaaaact
atattcttttctgaaagaagatatgatcttgggcgtgtggggcgatataagctttctaaa
aaatttggatttgatgatttgagtacatcagttttaactatgaatgatattgttaacacc
atatctcatcttttgagaatatatgaaggtcatgacattcttgatgatattgaccattta
ggaaatagaagagtgcgttctgttggggagcttcttaccaatatatataaaggtgcaatg
tcaagagttgaaaaaattgctaaagatagaatgtctaacaaggaagtttttaatttaaag
ccccaggaattaataagtgttaaacctattgtatctgctgttaaagaattttttgcaacc
agccagctttcgcagttcatggatcaggtcaatcctttggccgaacttactcacaaaagg
cgtcttaatgctcttgggccgggggggctttcaagagatagagcaggatttgaagtaaga
gacgtccattatactcattatggcagaatgtgtcctattgaaactcccgaagggccaaat
attggacttattgtttctttggcgacttattctagagttaatgattatgggtttttagaa
accccttataggaaggttattaatggagaggtaactgacgaattagaatatttatctgct
attgacgaagaaaaaaagtgtattgcccaggctaatgctgcttttgattctaatgggaag
tatcttgaagatttagtttctgttagaatttctggtgattatactacaacaaaccctaaa
aatatagattatatggacgtctctcctaggcagctaatttcagtatcttccgcattaatt
ccttttcttgagcacaatgatgcaaatagagctcttatgggttctaatatgcaaagacaa
gcagtaccgctgctttttcctaaacctccgattgttggtacgggcatggaaagtgttgtt
gcaaaagattcaggagtagtaattaaggctaaaagaagtggggaagttattcttgcaaca
agcaataaaatagttgttaaaccttttgaatcagagaatgctaaagatttagatgaatat
catattgttaagtatgaaaggacaaatcaagatacttgttttaatcaatctgttttagtt
aaagaaggtcaaaaggttgaaaggggcgaaataatagctgatggtcctgctactagatat
ggagaacttgctcttggtaataatttattgttgggagttattccttggaatggatttaat
tatgaggatgctatattaatttctgacagaattgtaaaagaagatctttatacatctatt
catattaaagaatttagcatagaggtaagagaaactaagcttggtcctgagaaggttaca
ggagatataccaaatgttagcgaaaagatactaaacaaattagatgaaaatggaattata
cggataggaacttatgtaaaacctggcgatattctggttggtaaagttactccaaagtca
gaaggagacattactcctgaatttagacttttaacttctatttttggagaaaaagcaaaa
gatgttaaaaataattcattaaaagttcctcatggtactgaaggtacagttattgatgtt
caaagaattactaaagaggatgttggcaatctttctccaggagttgaggaaatacttaaa
gtttatgttgctaaaaaaaggaagcttaaagagggcgataaaatggctggtcgacatggc
aataagggtgttgttgcaaaaatccttcctgttgaagatatgccttatcttgcagacgga
acccctcttgatatatgcttaaatcctttgggggttccgtctagaatgaatattgggcag
ttaatggaatcgcaattagggcttgctggtaaatatcttggcgaatcttataatgttcct
gtttttgaatctgcaacaaacgaacaaattcaagaaaaattaaaaaaagctggatttaat
ccaacttctaaagaaattttatatgatggttatacaggggagccgttcgaaaatgaagta
atggttggagtgatttacatgcttaaactgcatcaccttgttgatgataaaatgcatgca
agatcaacagggccatattctcttgtttctcagcaacctcttggaggaaaagctcaattt
ggtggtcaaagacttggagaaatggaggtttgggctcttgaggcttatggtgcggctcac
actcttcaagaacttttaacagttaaatctgatgatatgtcaggcagagtaaaaatatat
gaaaatatagtaaaaggcattcctactaatgtatcagggattcccgagtcttttaatgtg
ttaatgcaagagcttagagggcttggacttgatttgtcaatttacgatgataatgggaat
caggttcctttgacagaaaaagaagaagaattgattaataaaagctag
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