Bradyrhizobium brasilense 5G1B: QA635_00270
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Entry
QA635_00270 CDS
T09096
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA635_00270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baut03019
]
QA635_00270 (pnp)
03016 Transfer RNA biogenesis [BR:
baut03016
]
QA635_00270 (pnp)
Enzymes [BR:
baut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QA635_00270 (pnp)
Messenger RNA biogenesis [BR:
baut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QA635_00270 (pnp)
Transfer RNA biogenesis [BR:
baut03016
]
Prokaryotic type
tRNA degradation factors
QA635_00270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Tricorn_2nd
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WFU32938
LinkDB
All DBs
Position
62606..64768
Genome browser
AA seq
720 aa
AA seq
DB search
MFNSHSVEIDWGGRPLKLETGKIARQADGAVMATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVSLVAASAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMTETQLDLVVA
GTADAVLMVESEAKELNEDVMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTTIDNSE
IEKEMLGIAEQELRKAYAIPVKQERYAAVGAVKEKVLAHFFPEGQEPKYDKLRVAGVFKE
LEAKIVRWNILDTGKRIDGRDAKTVRNIIAEAGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGQRFAVLS
DILGDEDHLGDMDFKVAGTDHGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK
ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEVGQIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLASNRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQETGEDLEAKQKTEAPAAAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattcgcattccgtcgaaatcgactggggtggacgtcccctcaaacttgaaacc
ggcaagatcgcccgccaggccgacggcgccgtgatggccacctacggcgagaccgtggtg
cttgccaccgtcgttgcggcgaaggcgccgcgcgagggcgtcgacttcctgccgctcacg
gtcgactaccaggagaagacctacgccgcgggccgcattcccggcggctatttcaagcgc
gaaggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgcccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctctcgcac
gacatggagaacgatccggacatcgtgtcgctggtcgccgcctccgccgccctgacgctg
tcgggcgcaccgttcaagggcccgatcggcgccgcgcgcgtcggcttcgccaatgacgag
ttcattctcaacccgacgctcgacgagatgaccgagacccagctcgacctcgtcgtcgcc
ggcaccgccgacgccgtgctgatggtcgaatcggaagccaaggagctcaacgaggacgtg
atgctcggcgcggtcatgttcggccaccgccacttccagccggtcatcaacgcgatcatc
gagctcgccgagaaggctgccaaggagccgcgcgaagtcaccacgatcgacaattcggag
atcgagaaggagatgctcggcatcgccgaacaggagctccgcaaggcctatgcgatcccg
gtcaagcaggaacgctatgccgcggtcggcgccgtcaaggagaaggtgctggcgcacttc
ttcccggaaggccaggagccgaaatacgacaagcttcgcgtcgccggcgtgttcaaggaa
ctggaagccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgt
gacgccaagaccgtgcgcaacatcatcgccgaagccggcgtgctgccgcgtgcccacggc
tcggcgctgttcacccgcggtgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgatgcactgtcggggacgtacaaggaaacgttcctgctgcac
tacaacttcccgccctactcggtcggtgaaaccggtcgcctcggcggcaccaagcgccgc
gaaatcggccacggcaagctcgcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccgtacacgatccgcgtggtctccgagatcaccgagtcgaacggctcgtcctcg
atggcctcggtgtgcggcgcctcgctgtcgctgatggacgccggcgtgccgctgaagcgg
ccgaccgccggtatcgccatgggcctgatcctcgaaggtcagcgcttcgcggtgctgtcg
gacatcctcggtgacgaggatcatctcggcgacatggacttcaaggtcgccggcaccgac
cacggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggttgcgcttggccaggccaaggaagggcgcatccacattctcggcgagatggccaag
gcactgaccgcggcgcgcgccgagctcggcgaatacgcaccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
aacgatggcgaggcgatgaaggctgcgatcaagtggatcaagtcgatcgcctccgatccg
gaggtcggccagatctacgagggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggcgccaaggacggcctcgtccacatcagccagctcgcgtccaaccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaggcggtcgaccaggagaccggcgaggat
ctcgaggccaagcagaagaccgaagcgccggctgcggcgccgcgcgaagctgccggcgag
taa
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