Bradyrhizobium australafricanum: QA635_00590
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Entry
QA635_00590 CDS
T09096
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
baut
Bradyrhizobium australafricanum
Pathway
baut02020
Two-component system
baut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QA635_00590 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QA635_00590 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baut03021
]
QA635_00590 (rpoN)
Transcription machinery [BR:
baut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QA635_00590 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WFU33000
LinkDB
All DBs
Position
complement(130974..132629)
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AA seq
551 aa
AA seq
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MALTQRLEFRQSQSLVMTPQLMQAIKLLQLSNLDLSAFVEEELERNPLLERAADGPEPPV
AGEPAMERPDYGDSDGSSSYGDDGDASDMAAGPGGEAGFEPGQEEWLNRDLGSRAEIEQT
LDTRLDNVFSEEPAEAAARAAQDAPPSVYTEWGGGASSDDEYNLEAFVAAELTLADHLAE
QLAVAFSAPAQRMIGQYLIDLVDDAGYLPADLGQAAERLGASQQAVDEVVAVLQKFDPPG
VCARNLSECLAIQLRELDRYDPAMQALVEHLDLLAKRDIAGLRKLCGVDDEDITDMIAEI
RRLDPKPGLKFGTARTQTMVPDVYVRPGPDGGWHVELNSDTLPRVLVNQTYYAELSKTIR
KDGDKSYFTDCLQNATWLVRALDQRARTILKVATEIVRQQDGFFTYGVAHLRPLNLKAVA
DAIQMHESTVSRVTANKYMATNRGSFELKYFFTASIASADGGEAHSAEAVRHHIKQLIDG
EAPSAILSDDTIVERLRASGIDIARRTVAKYREAMRIPSSVQRRRDKQSMLGNALSAPAS
SSDRSRDTASV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacccaaagactagagttccgccagtcgcagtcgctggtgatgacgccgcag
ctgatgcaggcgatcaagctgctgcaactgtcgaacctggatctgtcggcctttgtcgag
gaagagctggagcgcaatccgctgctggagcgggccgccgacggaccggagccgccggta
gccggcgagccggccatggagcggccggactacggcgattccgacggttccagcagctat
ggggacgacggcgacgcctccgacatggccgcaggcccaggcggtgaggccggcttcgag
cccggccaggaggaatggctgaaccgcgacctcggcagccgtgccgagatcgagcagacg
ctcgatacccgcctcgacaacgtgttttccgaggagccggcggaagccgcggcgcgtgcc
gcgcaggatgcgccgccatcggtctacaccgaatggggcggcggcgcctccagcgacgac
gagtacaatctcgaagctttcgtggccgccgagctgacgcttgccgaccacctcgccgaa
caactcgcggtggcgttctcggcgccggcgcagcgcatgatcgggcagtatctgatcgac
ctggtcgacgacgccggctacctgccggccgatctcggccaggccgccgagcggctcggt
gcgtcgcagcaagcggtcgacgaggtcgtcgcggtgctgcagaaattcgatccgccgggc
gtatgcgcgcgaaacctgagcgaatgcctcgcgatccagctgcgcgagctcgatcgctac
gatccggcgatgcaggcgctggtcgagcatctcgacctgctcgccaagcgcgacatcgcc
ggcctgcgaaagctctgcggcgtcgacgacgaagacatcaccgacatgatcgccgagatc
cgccggctcgacccgaagcccgggctgaagttcggcaccgcgcggacgcagaccatggtg
cccgacgtctatgtgcgtccgggtcccgacggcggctggcatgtcgagctcaacagcgac
actctgccgcgcgtgctggtcaatcagacttattacgctgagctgtcgaagacgatccgc
aaggatggtgacaagtcgtatttcaccgactgcctgcagaatgcgacctggctggtccgc
gcgctcgatcagcgcgcccgcaccatcctgaaagtcgcgaccgaaatcgtccgccagcag
gatggcttcttcacttatggcgtcgcgcatttgcggccgctcaatctgaaggcggtcgcg
gacgcgatccagatgcatgaatcgacggtgtcgcgcgtcaccgccaacaaatacatggcg
accaatcgcggcagttttgaattgaagtattttttcaccgcctcgatcgcgtcggccgac
ggcggcgaggcgcattcggccgaggcggtgcgtcaccacatcaagcaattgatcgacggc
gaggccccgtcggcgatcctgtccgacgacacgatcgtggaacgtttgcgcgcctcgggc
attgatatcgcccgccgtaccgtcgcgaagtatcgcgaggcgatgcggataccatcctcg
gtgcagcgccgccgtgacaaacagagcatgctcggtaatgccctttcggctcctgcctcc
tcgtccgaccggtcgcgcgacacagcctccgtttag
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