Bradyrhizobium brasilense 5G1B: QA635_02040
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Entry
QA635_02040 CDS
T09096
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut00300
Lysine biosynthesis
baut00470
D-Amino acid metabolism
baut01100
Metabolic pathways
baut01110
Biosynthesis of secondary metabolites
baut01120
Microbial metabolism in diverse environments
baut01230
Biosynthesis of amino acids
Module
baut_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QA635_02040 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QA635_02040 (dapF)
Enzymes [BR:
baut01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QA635_02040 (dapF)
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Motif
Pfam:
DAP_epimerase
DUF2924
Motif
Other DBs
NCBI-ProteinID:
WFU33265
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Position
430670..431557
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AA seq
295 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDLRDSAAQGRAQVSAAEARAVASPSGGVPYDQLMVLQP
PRLDGTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQTSATFQTRAGLLNCWQGPAP
DLYTVDMGAPKFGWQDIPLAEEFRDTRYIELQVGPIDNPVLHSPSVVSMGNPHAIFWVDD
VNAYDLERFGPLLENHPIFPERANITLARIVDRDHITIRTWERGAGLTRACGSAACATAV
AAARLKRANRIVEITLPGGKLGIEWRERDDHVLMTGTADFEYEGRFDPALFASVA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcgccaatcacgcattcgccaagatgaacggcatcggcaacgagatcgtc
gtcgtcgacctgcgcgattcagcggcacaaggtcgggcacaggtgtcggcggcggaggcg
cgcgccgtggcttcgccgtccggcggcgtgccctatgaccagctgatggtactgcagccg
ccgcggctcgacggcaccgaagcgttcatctcgatctacaacaatgacggctcggaggcc
ggcgcctgcggcaacggcatgcgttgcgtggtgcggcggatcttcgagaagaccggccag
acatcagcgacgttccagacccgcgccggcttgctcaattgctggcaggggccggcgccc
gatctctacaccgtcgacatgggcgcgccgaagttcggctggcaggacattccgctggct
gaggaattccgtgacacccgctacatcgagctgcaggtcgggccgatcgacaatccggtg
ctgcattcgccctcggtggtctcgatgggcaatccgcatgcgatcttctgggtcgatgac
gtcaatgcctacgatctcgaacgtttcgggccgctgctggaaaaccatccgatctttccg
gagcgcgccaacatcaccctcgcccgtatcgtcgatcgcgaccacatcacgatccgcacc
tgggaacgcggcgccggcctcaccagagcgtgcggctcggcggcctgcgcgacggcggtt
gcggcggcgcggctgaagcgtgccaatcgcatcgtcgagatcacgctgcccggcggcaag
ctcggcatcgaatggcgcgagcgcgacgatcacgtgctgatgaccggcaccgccgatttc
gaatatgagggccgcttcgatccggcgctgttcgccagcgttgcttga
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